Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa01g3588 | ATGCAATACCACATGATGATCCAAGATTCCCACACCTGTACTCATGTCCATGCTATTGATGATGAACGAAGAGGGTTAGGGTTTGGGTCTCACCTTCTCCCTTTAAAGCTCTTACCAACGCACATTTTTGTTCTCTCTTTCTCGTTCACTCTCTCTCTCTCTCTCTCTAGGGTTCCAGATTCCTTGCCAAAGATGATGCAGCCTGGACCTGGCATGGCTCCCCCAAACATGGGTCAACAACCTAATCAGCAATACCAGCAGCAGCAACCCTACATGATGATGCCGCCGCACGCCCAGGCTCCACCGATGTGGGCTCCATCAGCCCAGCCCCCGCCGCAGCAGTCGGTGCCTCCGCCGCAACCTACCCAACACGTCCAGCCGACCAGCGCCGATGAGGTCCGTACCCTCTGGATCGGGGATTTGCAGTACTGGATGGACGAGAACTATCTGTACACTTGCTTTGCTCCCACGGGCGAGGTGGCCTCTGTGAAGGTCATTCGGAATAAGCAAACTAATCAGTCTGAAGGTTATGGGTTTATTGAATTTTTCACTCGTGCTGCTGCGGAGAGGGTTCTTCAAACCTATAATGGTGCAATCATGCAGAATGGTGGGCAAACCTACAGATTGAACTGGGCAACCTTTAGTGCGGGTGAGAGGCGTCATGATGACTCTCCAGATTACACAATATTTGTTGGAGACTTGGCTGCAGATGTTACTGATTACATGCTGCAGGAGACATTCAGGTCTCGATATCCCTCAGTTAAAGGTGCCAAAGTTGTGATTGATAGGCTCACTGGCCGGACAAAGGGTTATGGTTTTGTCAAGTTTGGAGATGAGAGTGAACAAATGCAAGCTATGACTGAGATGCAAGGGGTTCTATGTTCAACAAGACCCATGCGAATTGGACCAGCCACAAATAAAAACCTTGGGGGACAGCAAAAAACTTCCTATCAGAATCCTCAAGGGTCACAGAACGAGAATGATCCAAATAATACAACTATTTTTGTTGGCAATCTGGATCCTAATGTTACAGACGACCATCTGAGGCAAGTTTTTGGCCAGTATGGAGAGTTAATTCATGTGAAGATTCCGGCAGGAAAGAGATGTGGATTTGTCCAATTTGCTGACAGGAGCTGTGCAGAAGAGGCTCTACGGATGTTAAATGGTACGCTGTTGGGTGGACAAAATGTCCGTCTTTCATGGGGCCGTAGTCCTTCAAACAAGCAGGCCCAGCCAGATCCAAACCAGTATGGTGGATATTATGGATATGCTCAGGGGTATGAAAATTATGGATATCCTCCTGCTGCTTCACAGGACCCCAACATGTATGGCAGCTATCCAGGGTATGCCAATTACCAACCACCACAGCAACAGCAGCAAATGGGATATAGTTAA | 1395 | 0.4832 | MQYHMMIQDSHTCTHVHAIDDERRGLGFGSHLLPLKLLPTHIFVLSFSFTLSLSLSRVPDSLPKMMQPGPGMAPPNMGQQPNQQYQQQQPYMMMPPHAQAPPMWAPSAQPPPQQSVPPPQPTQHVQPTSADEVRTLWIGDLQYWMDENYLYTCFAPTGEVASVKVIRNKQTNQSEGYGFIEFFTRAAAERVLQTYNGAIMQNGGQTYRLNWATFSAGERRHDDSPDYTIFVGDLAADVTDYMLQETFRSRYPSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMQAMTEMQGVLCSTRPMRIGPATNKNLGGQQKTSYQNPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELIHVKIPAGKRCGFVQFADRSCAEEALRMLNGTLLGGQNVRLSWGRSPSNKQAQPDPNQYGGYYGYAQGYENYGYPPAASQDPNMYGSYPGYANYQPPQQQQQMGYS | 464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa01g3588 | 464 | MobiDBLite | consensus disorder prediction | 443 | 464 | - | - | |
Bisa01g3588 | 464 | SMART | rrm1_1 | 333 | 400 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | SMART | rrm1_1 | 228 | 302 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | SMART | rrm1_1 | 135 | 210 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | SUPERFAMILY | RNA-binding domain, RBD | 317 | 430 | IPR035979 | GO:0003676 | |
Bisa01g3588 | 464 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 134 | 214 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | SUPERFAMILY | RNA-binding domain, RBD | 112 | 213 | IPR035979 | GO:0003676 | |
Bisa01g3588 | 464 | MobiDBLite | consensus disorder prediction | 64 | 129 | - | - | |
Bisa01g3588 | 464 | MobiDBLite | consensus disorder prediction | 301 | 333 | - | - | |
Bisa01g3588 | 464 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 332 | 404 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | MobiDBLite | consensus disorder prediction | 95 | 124 | - | - | |
Bisa01g3588 | 464 | Gene3D | - | 226 | 302 | IPR012677 | - | |
Bisa01g3588 | 464 | FunFam | Polyadenylate-binding protein RBP45C | 219 | 310 | - | - | |
Bisa01g3588 | 464 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 229 | 292 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 334 | 397 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 136 | 200 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 227 | 306 | IPR000504 | GO:0003723 | |
Bisa01g3588 | 464 | MobiDBLite | consensus disorder prediction | 306 | 333 | - | - | |
Bisa01g3588 | 464 | Gene3D | - | 309 | 413 | IPR012677 | - | |
Bisa01g3588 | 464 | Gene3D | - | 72 | 221 | IPR012677 | - | |
Bisa01g3588 | 464 | SUPERFAMILY | RNA-binding domain, RBD | 221 | 322 | IPR035979 | GO:0003676 | |
Bisa01g3588 | 464 | MobiDBLite | consensus disorder prediction | 76 | 93 | - | - | |
Bisa01g3588 | 464 | PANTHER | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED | 124 | 417 | - | - | |
Bisa01g3588 | 464 | CDD | RRM1_SECp43_like | 135 | 215 | - | - | |
Bisa01g3588 | 464 | FunFam | Polyadenylate-binding protein RBP45 | 74 | 218 | - | - | |
Bisa01g3588 | 464 | CDD | RRM2_SECp43_like | 226 | 305 | - | - | |
Bisa01g3588 | 464 | MobiDBLite | consensus disorder prediction | 450 | 464 | - | - | |
Bisa01g3588 | 464 | FunFam | Polyadenylate-binding protein RBP45C | 311 | 434 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa01g3588 | Bisa-ChrBisa01 | 85100763 | 85108516 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa01g3588 | 228 | 421 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 23.618 | 7.58e-10 | 59.3 |