Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3514 ATGGCCATTGTGGAGCGGCTAGTGAGGTACTCTCGGTCATGGCGTTCAGTTCCCTCTTTGAAAACCCTAACTCCTTCACGTGCCTGCTCGCATCGCATTCCCCGCCCTTTCTTTAACAAATCTACTACGTTCACTGGTTCTGAGGTTTTAAGTTCAAGAGTTCCACCTGATGCTGCGGGACCTTACCCCTTGTTCCCGGCTGTATTAGCTGCTATTTTTGGGGTTGGTGTTTTCGAAACGGCATACTCGGACGCTAATGAGTCTGCAGCTGAACGTCCGTTACCTTCAACATCTATCCCAAGTTATGGGGGTCTGGAAGGAACTGCCAAGTCAGAACCTTCCTCATCATCAACTCTGCCTTCAAGTTCTGAGGGTCTGGAAGGAACTGCCAAGAAAGAACGTGAACGAATTCTACAGTTGCTTAGAAGTAGAGGAATTCGATATGGTGCTTATCCTAACTTCACTGTTGCTGTTAAAGGTCAACAGGTTAGCGTCAAATTTCAAATTCCTCCTGCATGCGAAATTTCACAACTTCTTGCAAGTCTTGTTTCACAACTTGGACTGAGGGCTGAAGAGAATGGTGGTGGTTCAGATATGTTATTGCGTGCTTGGGACAGCACGGTTGCTTGGCAACTTACCCTTCGTCATCCGCAAAAGCAGAAGGATATTCAGGGGAACAATCAATCTTCAACATATGTGAATTCATTTGAATTTCCAACTTACCTGGCTATATTGCAGGAAATTGAATTCATCAAGCGAGGGAGCTTGGATCCTAAAGAGCTCGATGCTTTTGTCTCTGTTTTACAAGTAGCTGGCACGAAGTTGGGACAAAGAAGATCCCTGGAAAGGAGATCAAGGGATGAGGCAGAAAAGGTGCCATCTGTAGATAAATCAATTGCTAGTCTTGAATCAATGGGAGTGAGAGTTTATGGACTTGATGAACCTGGAATATGTATCTCAAATGGTGAGATATCATGGGACAACATTGCCGGTTATGGTGACCAAAAACGAGAAATAGAAAATACGATACTGTTAGCTTTACAGAGTCCAGAAGTATATGATGATATTGCTCGTGGGACTCGCCATAAGTACGAGACAAACAGACCTCGAGCTGTGCTCTTTGAAGGTCCACCAGGTACAGGGAAAACTTCCTGTGCTCGTGTTATTGCTAATCAAGGGGGTGTCCCATTGCTGTATGTGCCACTAGAGGTTGTCATGTCCAAATACTACGGTGAAAGTGAACACCTGTTAGGGAAAGTGTTTTCTCTTGCCAACGAACTTCCTAAGGGTGCTCTTATTTTTCTAGATGAGGTTGATTCTTTTGCTGCTTCTCGTGATAGTGAAATGCATGAAGCCACACGCAGAATATTGTCAGTCTTGTTGCGACAGATTGATGGATTTGAGCAGGATAAGAGAGTGATTGTTATTGCTGCTACAAACCGAAAGCAAGACCTTGATCCAGCGTTAATCAGTCGGTTTGATACTGTAATCACTTTTGACTTACCTGATCATCATAACCGTAAGGAAATAGCAGCCAAATATGCCAAGCACCTTAAAAAATCAGAATTAGAAGAACTTGCAAAAGTTACAGAAGGGATGTCCGGAAGAGACATCAGAGATATTTGTCAGCAAGCTGAAAGGTCATGGGCATCGAAGCTTATTAGAGGACAAGGACCTAAAGATGGAGAACAACCGAGTCTTCCACCCCTGCAAGAGTATAAAAATAGTGTCTTGAACAGGCAAAAAGCCTTGAGTGTTGAAGCAAATCAGAAGTTCCGAAGGCCTCCTGCCTTCGGGAAAGCGAGGCAGTTAGATTTAGTCTAA 1824 0.4408 MAIVERLVRYSRSWRSVPSLKTLTPSRACSHRIPRPFFNKSTTFTGSEVLSSRVPPDAAGPYPLFPAVLAAIFGVGVFETAYSDANESAAERPLPSTSIPSYGGLEGTAKSEPSSSSTLPSSSEGLEGTAKKERERILQLLRSRGIRYGAYPNFTVAVKGQQVSVKFQIPPACEISQLLASLVSQLGLRAEENGGGSDMLLRAWDSTVAWQLTLRHPQKQKDIQGNNQSSTYVNSFEFPTYLAILQEIEFIKRGSLDPKELDAFVSVLQVAGTKLGQRRSLERRSRDEAEKVPSVDKSIASLESMGVRVYGLDEPGICISNGEISWDNIAGYGDQKREIENTILLALQSPEVYDDIARGTRHKYETNRPRAVLFEGPPGTGKTSCARVIANQGGVPLLYVPLEVVMSKYYGESEHLLGKVFSLANELPKGALIFLDEVDSFAASRDSEMHEATRRILSVLLRQIDGFEQDKRVIVIAATNRKQDLDPALISRFDTVITFDLPDHHNRKEIAAKYAKHLKKSELEELAKVTEGMSGRDIRDICQQAERSWASKLIRGQGPKDGEQPSLPPLQEYKNSVLNRQKALSVEANQKFRRPPAFGKARQLDLV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3514 607 Pfam ATPase family associated with various cellular activities (AAA) 372 500 IPR003959 GO:0005524|GO:0016887
Bisa01g3514 607 Gene3D - 502 564 - -
Bisa01g3514 607 MobiDBLite consensus disorder prediction 89 131 - -
Bisa01g3514 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 549 IPR027417 -
Bisa01g3514 607 ProSitePatterns AAA-protein family signature. 473 492 IPR003960 GO:0005524|GO:0016887
Bisa01g3514 607 SMART AAA_5 368 503 IPR003593 GO:0016887
Bisa01g3514 607 Gene3D - 323 501 IPR027417 -
Bisa01g3514 607 CDD RecA-like_protease 357 499 - -
Bisa01g3514 607 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 280 546 - -
Bisa01g3514 607 MobiDBLite consensus disorder prediction 90 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3514 Bisa-ChrBisa01 83614290 83619451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3514 323 545 Calmodulin-binding Proteins AT3G56690 32.609 1.02e-27 117