Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3496 ATGGGAGCATCCATACTCATTACCTTTTTGAGATATGTGATAATCTTCATAGTTCTAACCAAAACAAGTACTGCTCAAACACCAAACTATGGTGGAGATGACTGCCATAACCGTAGCTCAACTGAACAGCCTCTATCTGCTTCATACCAAGCCAATCGCAATGACGTCCTCTCGTGGCTGGCCAACGGCGCAGCCACCAGCAAAGGCTACAACTACACCGCCGTAGGCAACGGCAGTGATGCAGTCTACGGCCTCTACGATTGCCGGGGTGACGTTGTCGGATACTTTTGCCAGTTTTGCGTCTCTATCGCCACTAGAGAGGTTCTCCAACGTTGTCCCAATCAAACCTCCGCTTTTATTCGGTATGATATCTGCATGCTCCGATATTCCAACAAGAACTTCTTTGGCAACATGACAACAACTCCCACGTTGGAGACATTCCAATCGGCTAACGTGTCGGACCCAACAGAGCCGACGAAGGTATTGAGCTACATTAAGGGTTTAGTACGACAAGCCACAGAGCAGACGAAGCAGCTGTTCGCGATGGGAAGCTTCGACATGGGTGGTAGGAAGCGAAGGTATGGGATGGTGCAGTGTAGTAGAGACCTCACTGATAAGAGTTGCAAACAGTGCTTGGAGGTTATGGTAGACAAGGTTCCTCAGTGCTGTGAGCAGAAGCAGGGATGGCGGGTCGGGTCTTCTAGCTGTTTCATCATGTACGACAATTATATGTTTTACCAAATTAAGAATCAAACGACATCGAGTCCAAGAAATAACGGTGTTAACAAGTCGAAAGCCTTGATCATAAGCATAAGTATATTAGTGGCAGTAGCTATACTAAGTTGCAGTTTCTACTGCATTTGGAGAAGGAAGTTAAATAAAGATGAAATGCCATCTGAGGCCACTCCTATGTTTCTTGGCCTTCCCCAAAGAGACAGTCCATTGAACACAGATCTCCCTACAATCCCTTTGATTTCAATTCAACAGAGTACTCAAAACTTCTCAGAAGCATCTAAATTGGGAGAAGGTGGATTTGGTCCTGTTTACAAGGGAACTTTGCTAGATGGGAGGGAAGTTGCTATCAAAAGGCTGTCAAAATCTTCAAGTCAAGGCTCAGAAGAGTTTAGGAATGAAGTATTATTTATAGCCAAATTGCAACATAGAAACCTTGTTAGACTCTTGGCTTGCTGCATTGAGGAAACTGAAAAGCTACTTGTGTATGAGTACATGCCAAATTCTAGCCTTGACTGTCATCTTTTCAATGAGGCAAAAAGAAAGAAACTAGATTGGAAACTAAGGCTAAGCATTATTAATGGAATTGCTAGAGGACTTCTATACCTTCACGAGGATTCTCGTCTTAGAGTAATCCATAGAGATTTGAAAGCTAGTAACGTTCTTCTAGATTGTGAGATGAATCCTAAAATATCAGATTTTGGACTAGCAAGGGCTTTTGAAGGAGGCCAAAATCAAGGAAATACAGAAAGAGTAATGGGTACTTATGGATATATGGCACCAGAGTATGCTATGCAAGGATTATTTTCAGTGAAATCTGATGTTTTTAGCTTCGGAGTTCTTCTGTTAGAAGTCATTTGTGGGCAAAGGAATGGTGGTTTCTACCTCTCAGAACATGGTCAAAGTCTTATTATTTATACTTGGAGATTATGGAATGAAGGAAAATGTTTGGAATTAATGGATCCAATATTGAGGGAGTCTTACATAGAAAGTGAAATTTTGAAGTGCATACACATTGGTTTGTTGTGTGTTCAAGAAGATGCAGCAGATAGGCCAACTATGTCCTTTGTTGTCGTCATGCTTGCAAGTGATACTATGTCCCTTCCAAATCCTAATTACCCTGCATTTTCAGTTGGAAGAATGGCCATTGGTGAATCATCTACATCAAAAAATTCCAAAGAGCCTTCTATCAATGAGGTAACAGTATCTAATGTTACACCCCGGTAA 1959 0.4201 MGASILITFLRYVIIFIVLTKTSTAQTPNYGGDDCHNRSSTEQPLSASYQANRNDVLSWLANGAATSKGYNYTAVGNGSDAVYGLYDCRGDVVGYFCQFCVSIATREVLQRCPNQTSAFIRYDICMLRYSNKNFFGNMTTTPTLETFQSANVSDPTEPTKVLSYIKGLVRQATEQTKQLFAMGSFDMGGRKRRYGMVQCSRDLTDKSCKQCLEVMVDKVPQCCEQKQGWRVGSSSCFIMYDNYMFYQIKNQTTSSPRNNGVNKSKALIISISILVAVAILSCSFYCIWRRKLNKDEMPSEATPMFLGLPQRDSPLNTDLPTIPLISIQQSTQNFSEASKLGEGGFGPVYKGTLLDGREVAIKRLSKSSSQGSEEFRNEVLFIAKLQHRNLVRLLACCIEETEKLLVYEYMPNSSLDCHLFNEAKRKKLDWKLRLSIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDCEMNPKISDFGLARAFEGGQNQGNTERVMGTYGYMAPEYAMQGLFSVKSDVFSFGVLLLEVICGQRNGGFYLSEHGQSLIIYTWRLWNEGKCLELMDPILRESYIESEILKCIHIGLLCVQEDAADRPTMSFVVVMLASDTMSLPNPNYPAFSVGRMAIGESSTSKNSKEPSINEVTVSNVTPR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3496 652 Gene3D Phosphorylase Kinase; domain 1 309 409 - -
Bisa01g3496 652 Pfam Domain of unknown function (DUF3403) 607 652 IPR021820 GO:0004674
Bisa01g3496 652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 308 409 - -
Bisa01g3496 652 SUPERFAMILY Protein kinase-like (PK-like) 318 627 IPR011009 -
Bisa01g3496 652 Gene3D - 32 134 IPR038408 -
Bisa01g3496 652 Gene3D - 140 245 IPR038408 -
Bisa01g3496 652 Gene3D Transferase(Phosphotransferase) domain 1 410 613 - -
Bisa01g3496 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 105 648 - -
Bisa01g3496 652 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Bisa01g3496 652 SMART serkin_6 334 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3496 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Bisa01g3496 652 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Bisa01g3496 652 ProSiteProfiles Protein kinase domain profile. 334 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3496 652 Pfam Salt stress response/antifungal 171 243 IPR002902 -
Bisa01g3496 652 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Bisa01g3496 652 Pfam Protein tyrosine and serine/threonine kinase 338 603 IPR001245 GO:0004672|GO:0006468
Bisa01g3496 652 FunFam Liguleless narrow1 410 613 - -
Bisa01g3496 652 CDD STKc_IRAK 340 605 - -
Bisa01g3496 652 FunFam Cysteine-rich receptor-like protein kinase 28 32 133 - -
Bisa01g3496 652 MobiDBLite consensus disorder prediction 630 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3496 Bisa-ChrBisa01 83098315 83106373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3496 13 652 Receptor kinase-like Gene Family AT4G05200 42.097 1.11e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa01g3496 PK_Tyr_Ser-Thr 9.5e-48 CL0016