Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3463 ATGGCATCGGGTTCCCCTTCTCCGAATTCTTCCCCTTCTGCTGTGCCACCAACTCCTGCTAATACCTCACCGCCACCTCCTTCTTCACCTTCACCTACAATTACGTCTAACCCATCACCACCTCCCATTTCTTCTAATAACCCGCCTCCTTCATCTCCTTCTGACCCTTCTTCAGCTTCACCACCTCCTCCTCAGGCAGTACCTTCAACCCCGCCTCCTTCGCCGTCTCTAAATCCTCCGCCGCGATCTCCTCCTGATTCTCCACCAGCATCTCCCCCTCCATCAGCCACCACCTCCCCTCCTCCAACTGAGACCTCACCTCCCCCTCCAAACCCATCCCCACCACCTCCAGTGGTTGCTTCTCCTCCCCAAGCTTCTAATGTACCTCCTTCTGAAAATCCGCCTCCATCTGAACCCGTTTCACCTAGTCCTCCTCCAGCCAATGTCCCAACACCACCGTCCTCCACTTCTCCTGCTCCACCGCGGGGAAAGCCACCAGAAAGTACTCCTTCACCGCCTTCACTTACACCACCTCCTTCTGGTTCTAAGAGTCCTCCTTCTTCCACAAATGCTCCCCCTCCATCCACATTACCATCAAGTCCTCCTTCAGTCCCTTCAACCCCTTCACCTCCTCCAAATTCTGTGCCTGCGTCTCCAAGCAATGCATCATCACCTAGGGCTGCATCCCTACCCTCTATTCCAACAGAGAAACCTACTGCTAAGCCAACTAATGGTTCAGATTCATCCACACCTTCACATTCTGGAGGGTTAAGTACTGGAGAAGTTGCAGTTATTAGCGGGTTAGTTGGTTTTGTTGTCCTCAGCCTTCTTGTTATTGCTATCTGGTTTGTACAGAAACGTAAGAGGAAGAAAACAAGATCAAAAGTTGGCTATACTGTGCCTTCTCCATATGCCTCATCTCAAAATTCAGGTACAGTGTTCTTAAGGTCACAGTCTACCCATGATGGCTCTGGTAGTGATATGTATTCATCCTCAGAACCAGGGGCAGTAAGTAATTCAAGATCATGGTTCACATATGAAGAACTTGTCCAGGCGACAAATGGGTTTTCAGCACAAAATCTGTTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGCTTTCTCATAGATGGAAGAGTAGTAGCTGTGAAACAGCTCAAGGTTGGAGGTGGGCAAGGGGAGCGTGAATTTAGAGCAGAAGTTGAGATTATTAGCCGTGTACATCATCGCCACCTGGTTTCGTTGGTGGGTTACTGCATATCTGAGCATCAGAGATTGCTAGTCTATGACTATGTTCCCAACAATACGCTTCATTACCATCTCCATGATGAAGACAGGCCAGTTATGGATTTTGCTACCAGAGTCAAGGTTGCAGCTGGTGCAGCTCGTGGATTAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGATATTAAGTCATCAAACATCCTTCTTGACAACAATTTTGAAGCTCGAGTTTCTGACTTTGGGCTTGCAAAATTAGCATTGGATTCAAATACACATGTAACGACACGTGTGATGGGAACTTTTGGGTACATGGCACCAGAGTATGCAACAAGTGGGAAACTGACTGAAAAGTCTGATGTTTATTCATTCGGGGTTGTGCTTTTGGAGCTAATTACCGGTCGGAAGCCTGTTGATGCCTCTCAGCCAATTGGTGATGAGAGTCTGGTTGAATGGGCTCGACCTCTCTTGATTCAAGCACTTGACAATGAAGACTATGAAATATTGGTGGATCCAAGACTGGAGAAGAATTATAACAGGATTGAAATGTTTCGAATGATAGAGGCTGCTGCTGCCTGCGTACGCCACTCTTCAGCAAAAAGGCCACGAATGAGTCAGGTAGTGAGAGCTTTAGATTCAGCACAGCGATGGATCCTTCACAGCAATCTGCACAGATCAGAATGTTCAGAAGAATGGCTTTCGGGTTCGGCAGCCAAGATTACAGTTCAAGTTTCTTCAATGATTCTCAGAGTAGCTGGAGAAGCAGAGACCACCGAGACTCTAACACCTTCGTCTCCCAAGACAGATCCAGGCCTTGGGACGTTTGAAGGGAAATTTAGACACCTATGTAGAATTTTTATTCCACGCAGGAGGTCTGCTTGTAACATTTTCTGGAGAAGCTACATCATTTCTTCTTGA 2172 0.4751 MASGSPSPNSSPSAVPPTPANTSPPPPSSPSPTITSNPSPPPISSNNPPPSSPSDPSSASPPPPQAVPSTPPPSPSLNPPPRSPPDSPPASPPPSATTSPPPTETSPPPPNPSPPPPVVASPPQASNVPPSENPPPSEPVSPSPPPANVPTPPSSTSPAPPRGKPPESTPSPPSLTPPPSGSKSPPSSTNAPPPSTLPSSPPSVPSTPSPPPNSVPASPSNASSPRAASLPSIPTEKPTAKPTNGSDSSTPSHSGGLSTGEVAVISGLVGFVVLSLLVIAIWFVQKRKRKKTRSKVGYTVPSPYASSQNSGTVFLRSQSTHDGSGSDMYSSSEPGAVSNSRSWFTYEELVQATNGFSAQNLLGEGGFGCVYKGFLIDGRVVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHDEDRPVMDFATRVKVAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLIQALDNEDYEILVDPRLEKNYNRIEMFRMIEAAAACVRHSSAKRPRMSQVVRALDSAQRWILHSNLHRSECSEEWLSGSAAKITVQVSSMILRVAGEAETTETLTPSSPKTDPGLGTFEGKFRHLCRIFIPRRRSACNIFWRSYIISS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3463 723 MobiDBLite consensus disorder prediction 1 256 - -
Bisa01g3463 723 MobiDBLite consensus disorder prediction 10 218 - -
Bisa01g3463 723 ProSiteProfiles Protein kinase domain profile. 356 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3463 723 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 272 633 IPR047117 -
Bisa01g3463 723 MobiDBLite consensus disorder prediction 307 333 - -
Bisa01g3463 723 MobiDBLite consensus disorder prediction 219 256 - -
Bisa01g3463 723 SUPERFAMILY Protein kinase-like (PK-like) 329 629 IPR011009 -
Bisa01g3463 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Bisa01g3463 723 Pfam Protein tyrosine and serine/threonine kinase 359 629 IPR001245 GO:0004672|GO:0006468
Bisa01g3463 723 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Bisa01g3463 723 Gene3D Phosphorylase Kinase; domain 1 323 431 - -
Bisa01g3463 723 Gene3D Transferase(Phosphotransferase) domain 1 432 646 - -
Bisa01g3463 723 FunFam Proline-rich receptor-like protein kinase PERK8 328 431 - -
Bisa01g3463 723 SMART serkin_6 356 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3463 723 PRINTS Proline rich extensin signature 5 17 - -
Bisa01g3463 723 PRINTS Proline rich extensin signature 20 41 - -
Bisa01g3463 723 PRINTS Proline rich extensin signature 42 58 - -
Bisa01g3463 723 PRINTS Proline rich extensin signature 60 77 - -
Bisa01g3463 723 FunFam proline-rich receptor-like protein kinase PERK8 432 643 - -
Bisa01g3463 723 CDD STKc_IRAK 362 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3463 Bisa-ChrBisa01 82208250 82216398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3463 236 633 Trihelix Transcription Factor Family AT5G38560 70.773 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa01g3463 PK_Tyr_Ser-Thr 3.7e-47 CL0016