Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3443 ATGATAGTCCACTTGCAGTATGCATGCTCAGACTGCCATGATGTTATATTGTCTGAGAAGCGATGGTTTTGCAGCAAGTGCAAGAAATACCAGCAGTGTGAAAGATGCCATACTTCTGACACACATACTTCAATTAGTGGGGAGAAGCATGCACTCTCTCAGGTCCTCGTGGATGATATCCCCTTAGATACTACGGAGAATGACATCATTCTGGACAATGATGTATTTGAGAATAGGCATAATTTTTTGAGCTTCTGCCAAAAGAATCAATTTCAGTTTGACACTCTCCGTCGTGCCAAGCATTCCTCAATGATGATCCTCTATCATCTCAACAGTACAACTATGCTGACCGTTGCTAAAACATGTAGCATTTGCTATGAAGACATTGTCTTCCAGCTGAGTTGGCTATGTGACATTTGCTCACAGTTCTCTGTCTGCTCAGCATGCTATAAGGAGAAAGGTGCTGATTGCCATGAGCACAAGTTGAGACATTGTTCTTCAACAACTCATTGTGGATCAGGGAGCCAAGAGTTAAAGCAGAAACCCGTCCTGACACGGGAGCTTCTGGAAGTTTTAGAGCATGCATCTCAATGTCACTCAAGTATAAGTCAACCATGCTCTTATCCCAACTGTCTCCAGATTAAAAAGCTATTTTCCCATGCTAGTAAGTGTACTGTGAGAGCTTCTAGGGGTTGCCAATATTGCAAGAAGGCATGGCTGGTGCTAAGTCTACACTCAAGGACTTGTAGAGACTCAGAATGTCGCATCCCTCGTTGCATGGATTTGAAGAATCATGCAGATTGGATAGTGCAGCAATCTGAATCTCGGCGTAGAGCTGCAGTTGGAGGATCACCAGATATTGGTGCCCTTTATAGTATGTGTAATGCTGTTAGTACATGTTATTCTGTTTCCTCTTGTTTTTCTTTCGGGGAGAGGAGAGAAGGTTTAACAAAAAACACATTTTCAATACAATCAATCTCCAAGTTAAGGGAGGCAGCTAGAATTCCAATCTCTACACTGAGTTACTATTACTATCCGATGCCTAGAACTGTCAACAGGTACAAAGGGTCCCAATGTCTGACCCCAAATGAAAATGAGCATTGA 1104 0.4257 MIVHLQYACSDCHDVILSEKRWFCSKCKKYQQCERCHTSDTHTSISGEKHALSQVLVDDIPLDTTENDIILDNDVFENRHNFLSFCQKNQFQFDTLRRAKHSSMMILYHLNSTTMLTVAKTCSICYEDIVFQLSWLCDICSQFSVCSACYKEKGADCHEHKLRHCSSTTHCGSGSQELKQKPVLTRELLEVLEHASQCHSSISQPCSYPNCLQIKKLFSHASKCTVRASRGCQYCKKAWLVLSLHSRTCRDSECRIPRCMDLKNHADWIVQQSESRRRAAVGGSPDIGALYSMCNAVSTCYSVSSCFSFGERREGLTKNTFSIQSISKLREAARIPISTLSYYYYPMPRTVNRYKGSQCLTPNENEH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3443 367 ProSiteProfiles Zinc finger TAZ-type profile. 177 262 IPR000197 -
Bisa01g3443 367 Pfam TAZ zinc finger 187 259 IPR000197 -
Bisa01g3443 367 Gene3D TAZ domain 173 282 IPR035898 -
Bisa01g3443 367 SUPERFAMILY RING/U-box 2 55 - -
Bisa01g3443 367 SUPERFAMILY TAZ domain 183 263 IPR035898 -
Bisa01g3443 367 ProSiteProfiles Zinc finger ZZ-type profile. 4 60 IPR000433 GO:0008270
Bisa01g3443 367 Gene3D - 3 55 IPR043145 -
Bisa01g3443 367 SMART TAZ_2 179 260 IPR000197 -
Bisa01g3443 367 PANTHER CBP/P300-RELATED 63 281 IPR013178 GO:0004402|GO:0006355|GO:0016573
Bisa01g3443 367 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1 115 IPR031162 GO:0004402
Bisa01g3443 367 SUPERFAMILY RING/U-box 98 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3443 Bisa-ChrBisa01 81523910 81528480 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Bisa01g3443 zf-TAZ 5.4e-13 No_clan