Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3438 ATGTTCACTCCCACCAATTACAACCCTTACTTCTTTCCCTCCTCCTCTTCCAACCCTTTCTTCCTCACAAACCCTGACCCCAACACTGCTCCTTCCTCTGCAAATACCTCCTTCTCCTTCCACCTCCATGATCCTCTCGCTCTTCCCTTCCTCAACGCTCCAATCACCCCTGACGTCACTCTCTCCAATCTCGGCGCCGTCTCAGACTTCGCTCCCATGTGCGCGAAGCAGGATATCGTTCCCCCGCACTACGCGGGATATCATCATTCCAATAATCTCGCCGCCAGCAATTCCCTCAAGAAGCCGCAGTCATCAGCCGCCAAGAAGGACCGCCACAGCAAGATTCACACCTCCCAGGGCCTCCGCGACCGCCGGGTGAGACTGTCCATCGAGATCGCCCGCAAGTTCTTCGATCTGCAGGACATGCTAGGGTTTGACAAGGCCAGCAACACCCTCGACTGGCTCTTCTCCAAGTCCAAGAAGGCCATCCGGGAGCTCGAGCTCGCCGCCCAATGCAAGAACAACAGCAGCAGCACCAACACCAACACTCGCGCTTCCTCGTCCGACGACGAGGAAAACGGGAGGAAGAGGAAGGAGAAGGAGAAGAAGGAGTCGAGGGAGAAGGCGAGGGCGAGGGCGAGAGAAAGAACAAGTCACAAAGGAAAGAGCTTAGTGGAAAATGCAAATAATATTAGCAATGACAATTACGAAGGAGGGAGAGAGGAGTTCAAGGTGATTGAGGAGTCCATTGTGATCAAGAGGAAGTTGAAGCAGCAACAGCAATCCAATTTGGTGGCTTTTCATCCCCAAAATCAACTTGTGGATGAGATCCCTAATAAGGAATTACCAACTTTCACCAACACTAATACTACTCTTACTGTTGCCAGTGCCACTACTAATAATGCAACTAATCACCGTGATGATGATGATGATGATCACTATTCAATATTCCCCAATTTGTCTCCTAATTGGGACTCCAATGCCCGCTCCAACTTCTGCGCTATTGCCAGCATGAACCTATCCACAGAGCTTCAAATCTTTGGGAAGACATGGGAGGAGTGCAACAATCATCAGCGTCTGCACTAA 1086 0.5101 MFTPTNYNPYFFPSSSSNPFFLTNPDPNTAPSSANTSFSFHLHDPLALPFLNAPITPDVTLSNLGAVSDFAPMCAKQDIVPPHYAGYHHSNNLAASNSLKKPQSSAAKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFSKSKKAIRELELAAQCKNNSSSTNTNTRASSSDDEENGRKRKEKEKKESREKARARARERTSHKGKSLVENANNISNDNYEGGREEFKVIEESIVIKRKLKQQQQSNLVAFHPQNQLVDEIPNKELPTFTNTNTTLTVASATTNNATNHRDDDDDDHYSIFPNLSPNWDSNARSNFCAIASMNLSTELQIFGKTWEECNNHQRLH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3438 361 MobiDBLite consensus disorder prediction 173 222 - -
Bisa01g3438 361 MobiDBLite consensus disorder prediction 95 121 - -
Bisa01g3438 361 MobiDBLite consensus disorder prediction 104 121 - -
Bisa01g3438 361 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 95 270 IPR005333 GO:0003700
Bisa01g3438 361 Pfam TCP family transcription factor 107 188 IPR017887 -
Bisa01g3438 361 ProSiteProfiles TCP domain profile. 108 166 IPR017887 -
Bisa01g3438 361 MobiDBLite consensus disorder prediction 173 187 - -
Bisa01g3438 361 Coils Coil 188 216 - -
Bisa01g3438 361 ProSiteProfiles R domain profile. 203 220 IPR017888 -
Bisa01g3438 361 MobiDBLite consensus disorder prediction 188 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3438 Bisa-ChrBisa01 81414819 81416072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3438 90 175 TCP Transcription Factor Family AT1G67260 60.440 1.14e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa01g3438 TCP 3.2e-34 No_clan