Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3420 ATGCGGATGAGCTGCAATGGATGTCGGGTTCTAAGAAAAGGTTGTAGTGAGAATTGTAGCATCAGACCTTGTTTGCAGTGGATCAAAACCCCTGAGTCTCAAGCCAACGCCACTGTGTTTCTTGCTAAGTTCTATGGTCGTGCTGGCCTCTTGAACCTCATCAACGCTGGTCCAGAGCATCTTCGTCCTGGTTCGTCCCACTTTCTCGCATTTTCTGTTCCTTTTTCCCTGGAACTAATCGGGAAGTTTATTGATGTGATTGGGGCTTATTTATTATTATTATTTTTTCTTATTGCAGCTATATTTCGATCTCTGCTTTACGAGGCATGCGGACGCATACTGAACCCGATATATGGGTCGGTGGGTCTCTTATGGTCCGGAAGCTGGCAGCGGTGTCAGGTAGCCGTGGAGGCGGTGCTGAAGGGCGTTCCGATCACTCCTATCAACTCCGAAGCTGCCGCGACTGAGCGGGGCCCACCACTCAAGGCTTACGACATACGCCACGTGTCCAAGGACAAGAACTCGACCACCGCGTCCAACGATGCTAAGGAAGTCAAGACTCGGACCCGGTTCAAGCCGAAGAATGCAGCCAAGAAGGGGACTGGGTTGAGGGCAGATGAACCGGAAGAACTGACCGCGTGGGCCGGGTGCTGCGCCTCTGAGAAAGACGTAGCAGACCGGACGACGAGTCACGAGTCGTCGCTGAGTCACGAGTCGGAGGAAAAGCCGAACGTCGCCGTAGCGGCTCCGACGGCGGCAGAGGGCGAGAGCAAAGAGACCGAGAGCATGGTTTCGGTTGAGACCGCCGACACTACGATCCTCTTCCGAGACGAACCGGAATCGACTATTAAACGGACCGACCGACCCGATGCTGAGGGCGGTGACGTGGCACTGGATTTAAGGCTTGGGTTCGAACCGGTTTCACGCGCGCCCCACGTGGTGGTGCCGATGAAGAAGAGAAGGTTGGAATTCAATCAATTCAAGGACTATGGTGGTGGCTCGGCTGAAAACGGCTTGTGCAAGATGATGAAGCTGGGGCTTGAATAG 1047 0.5406 MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLLNLINAGPEHLRPGSSHFLAFSVPFSLELIGKFIDVIGAYLLLLFFLIAAIFRSLLYEACGRILNPIYGSVGLLWSGSWQRCQVAVEAVLKGVPITPINSEAAATERGPPLKAYDIRHVSKDKNSTTASNDAKEVKTRTRFKPKNAAKKGTGLRADEPEELTAWAGCCASEKDVADRTTSHESSLSHESEEKPNVAVAAPTAAEGESKETESMVSVETADTTILFRDEPESTIKRTDRPDAEGGDVALDLRLGFEPVSRAPHVVVPMKKRRLEFNQFKDYGGGSAENGLCKMMKLGLE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3420 348 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 270 - -
Bisa01g3420 348 MobiDBLite consensus disorder prediction 172 191 - -
Bisa01g3420 348 Pfam Lateral organ boundaries (LOB) domain 100 139 IPR004883 -
Bisa01g3420 348 Pfam Lateral organ boundaries (LOB) domain 4 68 IPR004883 -
Bisa01g3420 348 MobiDBLite consensus disorder prediction 172 204 - -
Bisa01g3420 348 MobiDBLite consensus disorder prediction 225 267 - -
Bisa01g3420 348 ProSiteProfiles LOB domain profile. 3 145 IPR004883 -
Bisa01g3420 348 MobiDBLite consensus disorder prediction 225 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3420 Bisa-ChrBisa01 80627305 80628351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3420 1 322 AS2 family AT3G02550 50.307 2.78e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa01g3420 LOB 4.1e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g3420 01 80627305 80628351 Bisa01g3420 01 80627305 80628351 ECH