Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3393 ATGAGCGTGGGTGTCCATTTTGTCTCTTTACGATTTGCCCGCACCCACGCGCGTCACCTTGCACTCGCTTTCACACGCCCTATCGCTGCCACGACTATGCTCTATTACTGTTACACAGCTCAACAAGCAGAGGAGAGTCACAAAAAGGTTCGTTTCTGTGGCAATGCCAGAGCCTCGAGCTTCAATCTTTGCCTCGGGCTTCTCAAAATTACATCGAATTGTATGATTCTCTATGTTCGTGGTGTTATATTTTGCAGCGCTTTTGATGCTTTCGATCTGGGCGTACTCCCCAGGAGCCTTGCCATCGTGGGTGGTTCAGGGATTTTGCAGGGTCTTTCATGTCTTTTGCACATGACATTATTGTACGGAATTTCCACAAGTGAATCCATTGCTTGGGGCGCTGAGGTTCGGAAATGTGTTGTTTTGGAAGTGTACTGTGAAATGAATGACACTTCTGGGAAGACGTCGTCGTGCTTGGCTATCACCGAAAAAAAGAAGAAGCAAGGACCTGGTGGTTGCATTAGCCTATTCTTTCAGCTCTTTGATTGGAATGGGAAACTTTCAAAGAAGAAGCTCTTCTCTAAGAAGCTTCTACCTCCTGCTCGTGCAAAACAAGCATCTAAGAAGTTTAAAGGAGACGAAAAAATGCCAAACTCCAAGCTCCACTTGATTGCTAATGAAAATAGCGGTGGCTTTCCAAGTGCCAAGAAAAGTGGGAATCGTGGTGTAGATGTAGAACAAAAGCATGAAATGCGAGTTCCAGGTCTAATAGCTAGGTTGATGGGTCTAGAATCCATTCCAGCTGCTCAGCGAGATAAGTCCAAGAAAGTTTCGTTTTCTGGTACTTGTGGTGATATGAAGGACGAGTCTCTGGGTAATCCTGGCGAGTCAGATAGACAAGTTGAGAATTTGGAAATGAGAATTGCAAGGCAAGATTCGATACCTCAAAAGCTTCAGAAAACAGGAACATATGAGAGAAAGGCAGTGACTAGGTTTGGAGCTGAAGCCCTGCAAATGAAGAGTGTATTCTCCCGAGCAAGAAAGCATAATACTAATTATCATCACCACCCTAAGCTTGCTCCTCACCTGAAGAGTCCAAGAATTACTTCTGGAAAGAACATGTCTCGAAGTTCGAGGTTAATAGGAGCAGCAACAAAAATTTTGGAACCTGGGCTGCAAGCTACAAGCCGCGCAAAAGGCTCTCTTACATATTCAAGTTCCATTTATCCTCCTAAGAATGACACTGCAGCAGATCTAGTAGGGGCTAAGTTGGCTAACCCACAAAACCAATCTGGTTATGATGCAAATGTAGCCAAGCATCTGGTTGGATCAACGGGGAAGACTTCTTGCAAAAATTGTGGTAATCCACTTGATGTTGTTGACTGCAATCTAGATGCTGAGGGGCAGCCAACTGTTCCTGAACCTATTATTTCAGAAGTGATCACAACCTCCTCTTTGGCATCAGTACCAAGGAAAACTAGGTCAGTCGTGACCCCTTATGAACAAGAAGGAGATTTGGTTCTTCTGACACCTCAACGGGATCTTACATCTATAGCTGAAGAAGATGGAAGAAGTAATATACAGTCTTGTCATGAACCCTCTGCCAGAAAAATGCCTTTGCCCCATGAAGGTCTTTCTCCATGGAGTTCATTGCACCAACCATGCAGGACCCAAGACTATGATATATCTTCTCTTGCCTTCAAGCACAAAACGCAAACACAAGAACAGACTTTAAGCAGTGAAAGAACATCGTCTGAATCTAAAATAAGCAGGACCAAAGACTTTGTTGCTTTGAACAGAAACCTTAGTGGTCGAACCAGGTTGAGGTCATCTACCAAAGTGGAAGCTTCAAAGTTTGACCTAGAGAGGAAACCTTGTGATTCCTTGCCTCGTGTAAGGACAATAGAACGGAAAAGAAGGATCTCAAGTATTGCACAAGTTGAGAGCACAGCTTCTGTTAATTCAGCTATTGTTAAGCAGAGAAATGCTCGTTCTGATGCAGAGAGAGGAAAAAGGAGGGACTTTAGTGCTTCCATTAACAGTACTAATGTTAAATGTAAACAAGGTAGTCAGGGAAAATCATACAAGTTTAATGGCAATAAGGTCAATGATGTAGTTTCATTTGCTTTTAATTCCCCATTGAACCACAAGACAGGAATTACCTCTGAAATGGAAGAGAAAAGTGGCAGTAATGAGATAAATACATATTTCCAGAAACCTTTGCAGTTGACAGGAGACGCTTTAGGTGCCTTTCTAGAACAGAAATTGAGGGAATTGATCTCTCGAGAAGATAAAATGTCGGCTAGTGGTACTCCACCTAAAAGGTCACCTGCCATGATTCTTCAGGAGCTGCTATCTGCTCTAAATGCTGAGCATCTGACCTGTCATGATGATCATATAGTCAATGCAGACAATGGTTTCCATGATGGGGCAAAAATGGGAAGGTTAGCAAGACCGACCTGCGATGTTCATCATCTTAGCCCTGGATCTGTTCTGGAAGCTTCTTTTTCTTCCAGCAGTATGGATGAAAGCTCAGGACACGATCTTCACCCTGAGTCAATGAGCAGCTCATATGATCAGTTGGAACATGATATCGAGGTTTTAGATTCTGTAACTTCATTGAACAAAGGGAAGAGAGGTAGTGAGGTATTGCCAGAGATCATCAACCAAACTTCTAGGATTTTACGAAGTCTATGTTCGTTCAGGACTAGAATGACAATAAACATGCTTTCCCATGTGAAAGATGTTATCCTGAATGCTGAGTTATTGCTTGGAAGTGCCCGCACCATGCACAGCAAAGATGGAGTGCCGCATCTTTTCATATCTCGCTTTCTCCTCAATGATCTCGACGCCATGGCACATGATGCCACAGGGATAGGTTTTAACGGCATTGTGGGCTGCGAAGAGAGAAGCCAACTCAAGGGGTTTTTGTTTGACTGTGTTATAGAATATCTAGAATCAAGTTGTTGCATATATGCTAAGTGTGGATTCAGGACATGGACAAAGCTGCCCCTATGCATGAATTCTGGCATGTTGGTTCAAGAGGTCAAGAGGGTGATTAAGAGGTGGGCATGTATGGCTGTGATGATACCTGATGAGATAATAGAATGGGAGATGAGCCACTCTCGAGGGAAATGGACCGATTTCGATATTGAAGCATTTGAGGCCGGTGTGGAAATTGATGGGGAGATACTTGAGGTATTGGTTGATGAAATTGTTGAAGACCTTGTAGATTGTAGAGGGGCACCATTTGAATCTATACCTAGCGTTTGCTACTAG 3279 0.434 MSVGVHFVSLRFARTHARHLALAFTRPIAATTMLYYCYTAQQAEESHKKVRFCGNARASSFNLCLGLLKITSNCMILYVRGVIFCSAFDAFDLGVLPRSLAIVGGSGILQGLSCLLHMTLLYGISTSESIAWGAEVRKCVVLEVYCEMNDTSGKTSSCLAITEKKKKQGPGGCISLFFQLFDWNGKLSKKKLFSKKLLPPARAKQASKKFKGDEKMPNSKLHLIANENSGGFPSAKKSGNRGVDVEQKHEMRVPGLIARLMGLESIPAAQRDKSKKVSFSGTCGDMKDESLGNPGESDRQVENLEMRIARQDSIPQKLQKTGTYERKAVTRFGAEALQMKSVFSRARKHNTNYHHHPKLAPHLKSPRITSGKNMSRSSRLIGAATKILEPGLQATSRAKGSLTYSSSIYPPKNDTAADLVGAKLANPQNQSGYDANVAKHLVGSTGKTSCKNCGNPLDVVDCNLDAEGQPTVPEPIISEVITTSSLASVPRKTRSVVTPYEQEGDLVLLTPQRDLTSIAEEDGRSNIQSCHEPSARKMPLPHEGLSPWSSLHQPCRTQDYDISSLAFKHKTQTQEQTLSSERTSSESKISRTKDFVALNRNLSGRTRLRSSTKVEASKFDLERKPCDSLPRVRTIERKRRISSIAQVESTASVNSAIVKQRNARSDAERGKRRDFSASINSTNVKCKQGSQGKSYKFNGNKVNDVVSFAFNSPLNHKTGITSEMEEKSGSNEINTYFQKPLQLTGDALGAFLEQKLRELISREDKMSASGTPPKRSPAMILQELLSALNAEHLTCHDDHIVNADNGFHDGAKMGRLARPTCDVHHLSPGSVLEASFSSSSMDESSGHDLHPESMSSSYDQLEHDIEVLDSVTSLNKGKRGSEVLPEIINQTSRILRSLCSFRTRMTINMLSHVKDVILNAELLLGSARTMHSKDGVPHLFISRFLLNDLDAMAHDATGIGFNGIVGCEERSQLKGFLFDCVIEYLESSCCIYAKCGFRTWTKLPLCMNSGMLVQEVKRVIKRWACMAVMIPDEIIEWEMSHSRGKWTDFDIEAFEAGVEIDGEILEVLVDEIVEDLVDCRGAPFESIPSVCY 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3393 1092 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 158 1075 - -
Bisa01g3393 1092 Pfam Domain of unknown function (DUF4378) 911 1071 IPR025486 -
Bisa01g3393 1092 MobiDBLite consensus disorder prediction 272 297 - -
Bisa01g3393 1092 MobiDBLite consensus disorder prediction 352 375 - -
Bisa01g3393 1092 Pfam DUF761-associated sequence motif 246 272 IPR032795 -
Bisa01g3393 1092 MobiDBLite consensus disorder prediction 836 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3393 Bisa-ChrBisa01 79568274 79574661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3393 155 1076 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.467 2.72e-82 284