Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3382 ATGAGGAGTAATTCCCTAAACTCTATTGATGTTCTAATTGCAGAATCAACGAAAAAGCTGGGTTGGCGACTTGAGACTGCTATAGGCATATCAGCAGGTATTGGTGGAATTGCTATAATCTCTATTTTGATTATTTGTAGTCTCAAGATGCGTTCTAGAATTAAAGGAAAAAAGACTATAAAAGAAACGAGAGCATTTCATCATAACAATCTTGAAACTTTCATGGAAGACTATGGCCCTTTGGGTCCAAAGCGATACAGTTACTCAGAAGTGAAAACGATGACCAAGTCATTCTCAGACAAATTAGGTCAAGGAGGATATGGTGTTGTATATAAAGCAAGCTTACCAGATGGTCGTCTTGTTGCAGTAAAAGTAATAAGTGAATCAAAGGGAAGTGGAGAAGGATTCATAAATGAAGTTGCAAGCATTAGTAGAACATCACATGTCAACGTAGTCACTCTCTTGGGATTTTGCTTCGAGAGGAACAAAAAGGCACTGATATATGAATATATGCCCAATGGTTCTTTAGATAAGTTCATCTATGAAAAAGGATCTCTCAATGCAATTTGTAGTTTGGAGTGGATGACAATGTACCAAATTTCCATTGGTGTAGCTCGAGGACTAGAATATTTGCATAGAGGATGTAATACAAGAATTCTGCATTTTGACATTAAGCCCCAAAACATTCTTTTGGATGAAGATTTCTGTCCAAAAATCTCTGACTTTGGATTAGCTAAAATATGTCTAAAGAAGGAGAGCATTATGTCAATATTGGGGACAAGAGGAACTGTAGGGTTCATTGCACCAGAAATATTCAGTAAAGCATTTGGTCGAGTTTCTCACAAATCTGATGTTTATAGTTATGGCATGTTGGTGCTTGAAATGGTTGGGGGAAGAAAGAATTATGATAGTGGAGGATCGCATAGTGATGAAATGTATTTTCCAGATTGGATTTATAAAGATCTTGAGCGAGGTAATATTTTATCCAATTCTCTGTCAATCAATGAGGAAGAAAATGAGGTAGTAAGGAAGATGACTTTAGTGAGTTTGTGGTGCATTCAAACAAATCCATCAGAAAGACCGTCAATGAGTAAAGTAGTAGAGATGTTAGAAGGACCCATTCATTCAATAACATTTCCACCGAAGTTTTCATTGCATTCTCCTACAACTGCAAGATCCCCATTACAATTCTCAGATGGGTCTACAATTGAAATCCTTGAGACAAATTCAATAAGCTCTTAA 1242 0.3655 MRSNSLNSIDVLIAESTKKLGWRLETAIGISAGIGGIAIISILIICSLKMRSRIKGKKTIKETRAFHHNNLETFMEDYGPLGPKRYSYSEVKTMTKSFSDKLGQGGYGVVYKASLPDGRLVAVKVISESKGSGEGFINEVASISRTSHVNVVTLLGFCFERNKKALIYEYMPNGSLDKFIYEKGSLNAICSLEWMTMYQISIGVARGLEYLHRGCNTRILHFDIKPQNILLDEDFCPKISDFGLAKICLKKESIMSILGTRGTVGFIAPEIFSKAFGRVSHKSDVYSYGMLVLEMVGGRKNYDSGGSHSDEMYFPDWIYKDLERGNILSNSLSINEEENEVVRKMTLVSLWCIQTNPSERPSMSKVVEMLEGPIHSITFPPKFSLHSPTTARSPLQFSDGSTIEILETNSISS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3382 413 SMART serkin_6 96 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3382 413 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Bisa01g3382 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bisa01g3382 413 Gene3D Transferase(Phosphotransferase) domain 1 171 377 - -
Bisa01g3382 413 Gene3D Phosphorylase Kinase; domain 1 75 170 - -
Bisa01g3382 413 FunFam serine/threonine-protein kinase PBS1-like 63 170 - -
Bisa01g3382 413 SUPERFAMILY Protein kinase-like (PK-like) 74 371 IPR011009 -
Bisa01g3382 413 ProSiteProfiles Protein kinase domain profile. 96 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3382 413 Pfam Protein kinase domain 99 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3382 413 FunFam PR5-like receptor kinase 171 381 - -
Bisa01g3382 413 PANTHER RUST RESISTANCE KINASE LR10-RELATED 68 387 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3382 Bisa-ChrBisa01 79335983 79337320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3382 23 386 Receptor kinase-like Gene Family AT5G38260 52.419 2.80e-133 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bisa01g3382 Pkinase 1.4e-45 CL0016