Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3376 ATGGATGAGTACCAAGAGATGGAGAGATTTGGGATGGATAATGATTTTGAAGATGGCCAATGGATTGGCGGCGAGTTCTACTACCGAAAGCGCAAAGAGAAACGTACTCAAACTAGAGATGATGTTCTTTATGGGGTTTTTGCAGACTCTGATGACGATGACAATGATGATTATTCCAGCAGAAAACGCAGAAAAGATCGTGATTTATCTAAGAAGCCTGATCTCTCTAAGCCTGTGAATTTTGTCTCAACTGGCACTTTTATGCCAAATCAGGATTCTGATAGCAATTCTAAAGAACAGAGTGAAAAAGAAAATTATGCTAGTGAGGATAGGCCAGGTATAGGTCTGGGTATGGGAACTACTAGCACGTTTGGATCTGGTTTAGGTTTTGATTCTAGTTATCATGAAAATGCATCTGATGATGAGAATAATGAAGATAAATTTCTGCCTACGGCATTTGGAAGGAAGATAAAGGAGGGAGCAATGAGAAGGGAGAAGGAACGAGAAAAAGCAAAATTGGAAAAGAAGAGAGGTCAAGGTCAAAATCAAGCTCATGGTGAATTTTCCAATGTTGGGAAGTTTGAGAAGCATACTAAGGGGATTGGAATGAAGCTGTTGGAGAAGATGGGTTATAAAGGAGGTGGTCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCTGTTGAGGCCACTATGAGGGCTAAGAATTCAGGCATTGGATTTAATGACTCCAAGGAAACTACACTTTTGCCCGGTTTGCAGGTTGAGAAGAAGACCTTGCCAGGAGTTAGTCAACCTGCTGAACCTGCAGTTGCTAGAGCCAAAGAAAGGTTATGGTCAAAGCAATCAAGGAAGAAGAAGAAAGATGAGGATGTTTATATTACTGCTGAGGAATTGTTAGCAAGCAACCAAGAGCAGGGTTTGGAGGTTGTTCAGAAGGTTTTTGATATGAGAGGGCCACAGGTTCGGGTAATTACAAATTTGTCTGATTTGAATGCTGAGGAGAAGGCTAAGGAAAATGATGTTCCAATGCCAGAGCTTCAGCATAATGTGGGGTTAATTGTTAGGTTGGCTGAAGCGGACATCCAAGAGATTGATAGAAATTTGAGAAGAGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAGAAAGAGAAGTTAGAAGATGAGGTATCACTCCAAAAGAAGCAGCTGGAAAATTTTGAGGAAATAATGAGTGTATTGGACCGAGTAGGAGAAGAGAATTCCAGGGGAACATTGACATTGGATTTGCTTGCACAGCACTTTAGTGACTTGCGGAAAAGATATGCTGATAGCTACAAGTTATGTAACTTGTCATGTATTGCTTGCTCTTATGCTTTGCCTTTGTTTATTAGAGTTTTCCAAGGATGGGATCCTCTTCGAAATCCTTCACATGGGTTGGAGTTGGTATCACTGTGGAAAACATTGCTTCAAGGAGAAGATTGCCTCGACATCTGGGATGTAACGTCGCCTTATACTCAATTGATTTCTGAAGTTGTACTACCAGCTGTCAGGATTTCTGGTATCAATACATGGCAGGCTCGGGATCCTGAGCCAATGTTACGGTTTTTGGAGTCATGGGAAAGGTTGCTTCCTTCTTCAGTTCTCACTAACATATTGGACAATATAGTCATGCCGAAATTGTCAAGTGCTGTAGATACATGGGAACCACATCGTGAGACAATTCCTATCCACACGTGGGTGCATCCATGGCTACCCTTGTTAGGACACAAGTTAGAGGGCATGTACCAGATGATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCATCCAAGTGATGGTTCTGCTTATGCTATATTGTCACCTTGGAAGACCGTATTTGATTCAGCAAGTTGGGAACAGCTTATGCTTCGATTTATTGTGCCAAAATTGCAGCTTGTCTTGCAAGAGTTCCAGGTGAACCCAGCAGATCAGAAACTTGATCAATTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCGATTCATCTGATGGTTGATATGATGGAGAAGTTCTTCTTCACCAAGTGGCTTCAAGTTTTGTATCACTGGTTGTGTGCAAATCCTAATTTTGAAGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTAGCTAATGAAGGTATACGATATCAGCTTAACCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTGAAAGAAAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCTGCAGCTCATAGTCAATCCCAAGCTGCTTCAAGCTTGGATGGTGCTGCCCATAGGGATGGTCTACATGAGATGAGCTTGAAGGAAGTCATTGAGGCCCATGCCCAACAACATGGTTTGCTATTCAAGATTAAACCCGGTCGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAGCATTATAATAGACTCTCTAAATCAGAAGGTATATGCCCAAACTGACGAAGCATGGTCTTTGGAATCTCTCCAAGGCTTACTAGAGTTGCATAATAAGTCCCTTATTATCAGGGGAACCTTCGTGGTTTGA 2613 0.4194 MDEYQEMERFGMDNDFEDGQWIGGEFYYRKRKEKRTQTRDDVLYGVFADSDDDDNDDYSSRKRRKDRDLSKKPDLSKPVNFVSTGTFMPNQDSDSNSKEQSEKENYASEDRPGIGLGMGTTSTFGSGLGFDSSYHENASDDENNEDKFLPTAFGRKIKEGAMRREKEREKAKLEKKRGQGQNQAHGEFSNVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEATMRAKNSGIGFNDSKETTLLPGLQVEKKTLPGVSQPAEPAVARAKERLWSKQSRKKKKDEDVYITAEELLASNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNVGLIVRLAEADIQEIDRNLRRERETALSLKKEKEKLEDEVSLQKKQLENFEEIMSVLDRVGEENSRGTLTLDLLAQHFSDLRKRYADSYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSLWKTLLQGEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWERLLPSSVLTNILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPIHLMVDMMEKFFFTKWLQVLYHWLCANPNFEEVTKWYLGWKELIPKELLANEGIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHSQSQAASSLDGAAHRDGLHEMSLKEVIEAHAQQHGLLFKIKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQTDEAWSLESLQGLLELHNKSLIIRGTFVV 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3376 870 ProSiteProfiles G-patch domain profile. 198 243 IPR000467 GO:0003676
Bisa01g3376 870 Pfam GC-rich sequence DNA-binding factor-like protein 421 687 IPR022783 -
Bisa01g3376 870 Pfam G-patch domain 198 239 IPR000467 GO:0003676
Bisa01g3376 870 MobiDBLite consensus disorder prediction 77 95 - -
Bisa01g3376 870 Coils Coil 163 183 - -
Bisa01g3376 870 MobiDBLite consensus disorder prediction 46 193 - -
Bisa01g3376 870 Coils Coil 354 402 - -
Bisa01g3376 870 MobiDBLite consensus disorder prediction 55 74 - -
Bisa01g3376 870 PIRSF TFIP11 1 861 IPR024933 -
Bisa01g3376 870 MobiDBLite consensus disorder prediction 119 133 - -
Bisa01g3376 870 MobiDBLite consensus disorder prediction 135 181 - -
Bisa01g3376 870 SMART G-patch_5 196 241 IPR000467 GO:0003676
Bisa01g3376 870 Pfam Tuftelin interacting protein N terminal 6 105 IPR022159 -
Bisa01g3376 870 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 853 IPR045211 GO:0000390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3376 Bisa-ChrBisa01 79255212 79260685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3376 198 239 C2H2 Transcription Factor Family AT5G26610 47.619 5.67e-07 50.4