Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3358 ATGAAATGTGTGTTAATTGAGCAGGCAGTGAGTGCAGAAGCACCAATATTAATAGCCAAAGCATGTGAGATTTTCATTGAGGAGCTCACACTTCGTTCATGGCTTAATACTCAACAAAACGACAGGCAAACTATGCGTCGCCACGACATTGCTAGAGCCATTGAAGAAGATGACTCTCACACCTTTCACTTTCTGGCCGGTTCTGTCCCAATGGAGCACCAACCACACTGTCCTCTTAAGGACATGGTGGCAGTAAACAAAGAGCAAGTTGCTCAGTCTCACATGATGATGCCGATGAGTGGAGAGCAGCAGGTGGCTCCATGGGATCAACAATTTCCTGAGGCTTATTACATGATGCAGCCACCTTTTATGCCTTCTCACCAAATCCCCTATCGTCGCTTTCATCCTTATTAA 414 0.4565 MKCVLIEQAVSAEAPILIAKACEIFIEELTLRSWLNTQQNDRQTMRRHDIARAIEEDDSHTFHFLAGSVPMEHQPHCPLKDMVAVNKEQVAQSHMMMPMSGEQQVAPWDQQFPEAYYMMQPPFMPSHQIPYRRFHPY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3358 137 SUPERFAMILY Histone-fold 9 70 IPR009072 GO:0046982
Bisa01g3358 137 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 9 96 - -
Bisa01g3358 137 Gene3D Histone, subunit A 1 71 IPR009072 GO:0046982
Bisa01g3358 137 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 54 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3358 Bisa-ChrBisa01 78747851 78751503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3358 10 132 CCAAT-HAP5 Transcription Factor Family AT5G63470 39.837 7.01e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa01g3358 CBFD_NFYB_HMF 2e-07 CL0012