Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3355 ATGGGGAAACTCCACTTCTCTTTTCTCATGTTCTCACTGCTTTGTTTTATGCCCTCTTTAGCTTGGAGTACTACAAATATCAACACTGATAAATCTGCACTTCTTGCCTTCAAATCTTTCATCACCTTCGATCCAGACAACCTCTTAGCCAATTGGTCTGTCTCTTCTTCTTCTCCATGCACTTGGGTTGGTGTCACTTGCAATACTCATCATGAAAGGGTTCATTCCTTGAATCTTGGAGACATGGGTCTCAAAGGTAATATATCACCTCAATTGGGAAATCTCTCATTCCTTGTTGAGCTTGATCTTAGTAATAACAATTTTTACGGTCAAATGCCAAAAGAATTGGTTCAATTACGTAGACTGAAAGTACTCAACTTCTGTTATAATGAATTTGATGGAGAAGTTCCCACATGGATAGGGGATTTATCTGCACTTCAACACTTAAATCTATGCAACAATAGTTTTAGCGGATTTATTCCATTATCAGTATTCAACTTGTCAAGGTTGAGGACTTTGAATTGGAGATATAATTTTGTCGAGGGAACGATTCCAGTTGAGATGGGAAGACTCAAGAACTTGAAGAGTTTAAGAATTGCAAACAATAAGCTTTTAGGAATCATACCCCAAATATTTTTCAACTTATCTTTGCTTGAACTATTGAGTTTGTCTTATAACACTTTATCAGGAGTCATTCCTAAAGAGATTGGTTACCTTCCACATCTAAAGATCATGTATCTTGGAGGCAATCAACTTTCAGGGTCTATACCATCTTCAATATTTAATAATTCAATGCTACAGGAAATTAGTCTTGAATCTAATCATTTGTCCGGTAGTCTCCCATCGAATATGTGTTATGGACTTCCAAAACTAGAATTACTTTATTTACATGTCAATGACTTGTCTGGTGCATTACCATCTGATTGGCATCAGTGTAAAGAATTGAAAGATTTGCAACTATCAGAGAACACATTCAACAGAGGATACTTACCAAGTGACATTGGAAATTTGACTAACCTCCAATACTTATATCTTGTAGAGGACAACTTGAAAGGGGAAATCCCGTCTTCTCTTTTCAACATACCTTCTTTGAGAGAGGTCATCTTTGCCTCTAACTATTTACACGGTAGTCTGCCACAAGATATGTGCAATCAACTTCCTTTGCTTGAAATTTTCAGTGTCAGTGAAAATCAAATTGAGGGAAGCATTCCAAAATCAATTAACAATTGTACATCTTTGAAAGAATTATACTTGGGCAATAATTCATTTACGGGTTTTGTACCAAACAAGATTGGCAATCTTGATAAATTTAGGTGTTTGGATTTGGGAAGCAACTATTTGAGTGGACTTGTTCCTTCTAATTTTTTCAACATTTCAACAATGACAATGTTGCTTCTTGGATCTAATTCCTTTCATGGACTTCTCCCATCAAACATAGGAAGTGGCCTTCCCAACCTAATATATTTGGATTTGGGAGACAATGAATTTACTGGGAAACTCCCAAAGAGCATATTCAATGCTTCTAAGCTCACTTCTTTAGATCTATGGCAAAATAAATTCAACGGAGTTATTCCCAGTCCACTTGAAAATTTAACCAACTTGTTTGAATTAAATTTTCATGGGACTATTCCTACTACAATGAACAAATTGCAAAGCCTTCAATCTTTGGATCTCAGTTACAACAAATTGCAAGGCACCATAATAAAAGAACTTTGCCAAATCAAAAGTTTGGGGGAGTTGTATCTATCCAATAACATGTTTTTGGGACGTGTGCCAAAATGTCTTGGGAATCTTACTTCCTTGAGAAAGCTAAACTTAGGCTCTAACAAATTGACTTATCATATACCCTCTTCACTTTGGAGTCTCGGAGATATTTTGCAAATAAACTTATCCTCTAATACATTGAGTGGAAAAATTCCATTTGAAATTTCAAACTTAAGGGCCCTTGTATTGATGGACTTATCAATAAATCAAATTTCAGGGAACATTCCTACAACTATTGGTGACTTACAAACTTTGCAAAGTCTATCTTTAGCACATAACAAATTGCAAGGGGTTATTCCTAAATCATTTGGCAAGATGGTTAGCTTAGATTTCTTGGACCTTTCTCAAAATAATCTTTCTGGAGTGATTCCAAAATCCTTGGAGTCGCTTCTCCATCTTAATTACCTTAATCTTTCTTTCAATATCTTGCATGGAGAGATTCCAGATGGTGGCCCTTTCAAAAATTTTACAGCTGAATCTTTTATGATGAATGAAGGTCTTTGTGGGAATCCTAAATTTCAAGTCCAACCATGTAGAAAAGGAAACAAGCATATGTCAACTAAAGAGATGTTTTTGCTCAAGTGCTTGTTGCCTATCATTGTGGCAATCATCTTGGTTGCTTCATGCGTATTCTTTCTAAAACGCAAGAGAGATTATGTTGGTGATTCAACCAACCGAGATTTATTAGATTTACAGAAACTAATTAGGATACCCTACTATGAACTTCTTCAAGGAACAAATGGATTTGATGAGAGTAACCTTCTTGGCAGGGGCAGTTTTGGATCAGTATACAAAGGTATTCTTTCAAGTGGAAAGACAATTGCAGTTAAAGTATTTAATCTAGAATTGGAAGGAGCATTAAGAAGCTTTGATACTGAATGTGCTACAATGTGCAACTTGCGTCATCGCAATCTTACTAAGATCATAAGTGCTTGTTCAAATGTTGATTTTAAATCTCTAATAATGGAATTTATGCCAAATGGAAATTTAGACAGATGGTTGTATTCTCATAACTATTACTTAGATATCTTGCAAAGACTGAACATAATGATTGATGTGGCATCAGCATTGGAGTATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATGTAAAGCCAAGCAATGTTTTATTGGATGAAGATATGGTGGTCCATCTTAGTGATTTTGGCATTGCCAAATTGTTAGGGGAGGGGCAGCTAGAAATTTATACAAAGACTTTAGCTACACTTGGATATATTGCACCAGAGTATGGATCCAAAGGAGTTGTTTCCATTAAAGGAGATGTGTATAGTTATGGTATTATGCTGATGGAAATATTTACAAGGAAGAAGCCAACAGATGACATGTTTATTCAAGGTTTAAGTTTGAAAGACTGGGTCAGCAAATCAATACCACATGCGACAACCCAGGTTTTGGATCCCAATTTGTTGCAAAGAGACAATCAAAGCATTGATAATATATCATCGCATATATCATCAATTTTTGAGTTAGCCTTGAGTTGTTGCACTGATTTACCTGATACACGAATTAATATGACGAGTGTTGTGGTGTCATTGAAAAAAATTAAGGCCATGTTTATGCAAAGTGGTATATAA 3366 0.3559 MGKLHFSFLMFSLLCFMPSLAWSTTNINTDKSALLAFKSFITFDPDNLLANWSVSSSSPCTWVGVTCNTHHERVHSLNLGDMGLKGNISPQLGNLSFLVELDLSNNNFYGQMPKELVQLRRLKVLNFCYNEFDGEVPTWIGDLSALQHLNLCNNSFSGFIPLSVFNLSRLRTLNWRYNFVEGTIPVEMGRLKNLKSLRIANNKLLGIIPQIFFNLSLLELLSLSYNTLSGVIPKEIGYLPHLKIMYLGGNQLSGSIPSSIFNNSMLQEISLESNHLSGSLPSNMCYGLPKLELLYLHVNDLSGALPSDWHQCKELKDLQLSENTFNRGYLPSDIGNLTNLQYLYLVEDNLKGEIPSSLFNIPSLREVIFASNYLHGSLPQDMCNQLPLLEIFSVSENQIEGSIPKSINNCTSLKELYLGNNSFTGFVPNKIGNLDKFRCLDLGSNYLSGLVPSNFFNISTMTMLLLGSNSFHGLLPSNIGSGLPNLIYLDLGDNEFTGKLPKSIFNASKLTSLDLWQNKFNGVIPSPLENLTNLFELNFHGTIPTTMNKLQSLQSLDLSYNKLQGTIIKELCQIKSLGELYLSNNMFLGRVPKCLGNLTSLRKLNLGSNKLTYHIPSSLWSLGDILQINLSSNTLSGKIPFEISNLRALVLMDLSINQISGNIPTTIGDLQTLQSLSLAHNKLQGVIPKSFGKMVSLDFLDLSQNNLSGVIPKSLESLLHLNYLNLSFNILHGEIPDGGPFKNFTAESFMMNEGLCGNPKFQVQPCRKGNKHMSTKEMFLLKCLLPIIVAIILVASCVFFLKRKRDYVGDSTNRDLLDLQKLIRIPYYELLQGTNGFDESNLLGRGSFGSVYKGILSSGKTIAVKVFNLELEGALRSFDTECATMCNLRHRNLTKIISACSNVDFKSLIMEFMPNGNLDRWLYSHNYYLDILQRLNIMIDVASALEYLHHGSSIPVVHCDVKPSNVLLDEDMVVHLSDFGIAKLLGEGQLEIYTKTLATLGYIAPEYGSKGVVSIKGDVYSYGIMLMEIFTRKKPTDDMFIQGLSLKDWVSKSIPHATTQVLDPNLLQRDNQSIDNISSHISSIFELALSCCTDLPDTRINMTSVVVSLKKIKAMFMQSGI 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3355 1121 Gene3D Phosphorylase Kinase; domain 1 802 912 - -
Bisa01g3355 1121 Pfam Leucine Rich Repeat 146 165 IPR001611 GO:0005515
Bisa01g3355 1121 Pfam Leucine Rich Repeat 412 434 IPR001611 GO:0005515
Bisa01g3355 1121 SUPERFAMILY L domain-like 28 326 - -
Bisa01g3355 1121 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 913 1120 - -
Bisa01g3355 1121 ProSiteProfiles Protein kinase domain profile. 837 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3355 1121 SUPERFAMILY RNI-like 394 736 - -
Bisa01g3355 1121 Gene3D Transferase(Phosphotransferase) domain 1 913 1119 - -
Bisa01g3355 1121 Gene3D Ribonuclease Inhibitor 180 286 IPR032675 -
Bisa01g3355 1121 Gene3D Ribonuclease Inhibitor 385 480 IPR032675 -
Bisa01g3355 1121 ProSitePatterns Protein kinases ATP-binding region signature. 843 865 IPR017441 GO:0005524
Bisa01g3355 1121 Gene3D Ribonuclease Inhibitor 481 775 IPR032675 -
Bisa01g3355 1121 FunFam Inactive leucine-rich repeat receptor-like protein kinase 482 767 - -
Bisa01g3355 1121 SMART LRR_typ_2 670 693 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 598 622 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 191 214 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 483 507 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 694 717 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 95 119 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 386 410 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 143 167 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 239 263 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 288 311 IPR003591 -
Bisa01g3355 1121 SMART LRR_typ_2 550 574 IPR003591 -
Bisa01g3355 1121 SMART serkin_6 837 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3355 1121 Pfam Leucine rich repeat 672 729 IPR001611 GO:0005515
Bisa01g3355 1121 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Bisa01g3355 1121 SUPERFAMILY Protein kinase-like (PK-like) 820 1109 IPR011009 -
Bisa01g3355 1121 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Bisa01g3355 1121 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 188 - -
Bisa01g3355 1121 SMART LRR_sd22_2 670 691 - -
Bisa01g3355 1121 SMART LRR_sd22_2 191 217 - -
Bisa01g3355 1121 SMART LRR_sd22_2 410 436 - -
Bisa01g3355 1121 SMART LRR_sd22_2 550 573 - -
Bisa01g3355 1121 SMART LRR_sd22_2 507 533 - -
Bisa01g3355 1121 SMART LRR_sd22_2 694 720 - -
Bisa01g3355 1121 FunFam Leucine-rich repeat receptor-like protein kinase TDR 212 481 - -
Bisa01g3355 1121 Pfam Protein kinase domain 838 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3355 1121 FunFam Serine-threonine protein kinase plant-type 817 912 - -
Bisa01g3355 1121 PRINTS Leucine-rich repeat signature 598 611 - -
Bisa01g3355 1121 PRINTS Leucine-rich repeat signature 553 566 - -
Bisa01g3355 1121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Bisa01g3355 1121 Gene3D Ribonuclease Inhibitor 287 384 IPR032675 -
Bisa01g3355 1121 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Bisa01g3355 1121 SUPERFAMILY L domain-like 332 424 - -
Bisa01g3355 1121 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 388 1111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3355 Bisa-ChrBisa01 78532606 78540476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3355 1 1114 Receptor kinase-like Gene Family AT5G46330 34.645 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa01g3355 Pkinase 6.7e-44 CL0016