Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3331 ATGCTGCTTTCTCGCGGTGGTCAATTTGATAATAATTACGCTTCCTACGGCGGCCACCGTGTGTTCGAGTGCAAGACCTGTAACCGGCAGTTCCCGTCTTTTCAGGCGCTGGGCGGCCACCGCGCTAGCCACAAGAAGCCGAGGGCGGCTGCGGCGGCCGGGGAGCTCGAGATCAGCCGGCTGCACCTTGATGCCAAGCCCAAAACTCATGAGTGCCCGATTTGTGGAATGGAGTTTGCAATAGGGCAGGCTTTGGGTGGTCACATGAGGAGGCATAGAGATAGAAACAATAATAATAATAATAATAATAATAATGGTCACAAAACGCAGAGTTCTACTATCACCTTAAGTAGTAGCAGCAGTGGAAGCAGTCTTGATTCTAGAGTTAATGGTAATAACAAGAGAGAGAGAGTTTTGTCTTTGGATTTGAACTTGACGCCGTTTGAGAACGATTTGGAGTTTCTCAAGATTGGGATCGCTAACTCTGTTTGA 492 0.4837 MLLSRGGQFDNNYASYGGHRVFECKTCNRQFPSFQALGGHRASHKKPRAAAAAGELEISRLHLDAKPKTHECPICGMEFAIGQALGGHMRRHRDRNNNNNNNNNNGHKTQSSTITLSSSSSGSSLDSRVNGNNKRERVLSLDLNLTPFENDLEFLKIGIANSV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3331 163 MobiDBLite consensus disorder prediction 86 131 - -
Bisa01g3331 163 Gene3D Classic Zinc Finger 19 92 - -
Bisa01g3331 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Bisa01g3331 163 PANTHER ZINC FINGER PROTEIN ZAT5 17 150 - -
Bisa01g3331 163 SMART c2h2final6 22 44 IPR013087 -
Bisa01g3331 163 SMART c2h2final6 70 92 IPR013087 -
Bisa01g3331 163 SUPERFAMILY beta-beta-alpha zinc fingers 20 92 IPR036236 -
Bisa01g3331 163 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Bisa01g3331 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
Bisa01g3331 163 Pfam C2H2-type zinc finger 21 47 - -
Bisa01g3331 163 Pfam C2H2-type zinc finger 70 94 - -
Bisa01g3331 163 MobiDBLite consensus disorder prediction 98 129 - -
Bisa01g3331 163 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3331 Bisa-ChrBisa01 77824815 77825306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3331 1 158 C2H2 Transcription Factor Family AT2G28710 46.203 1.81e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g3331 zf-C2H2_6 4.3e-09 CL0361