Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3329 ATGGTTCTATCGAACAAGAAGCTGAAGCTGAGGCTACGAGCTGAGTTAGCTCAATCTCAGGCCGCAAATCCAGACTTGAGTTCCGATCCACAGTGTTCTCTGAAGAAGTTTCTTGACTCTGCGGCCCTCAAATTCCGATTATCGAAGAGAGAGAAACGCAGAAAGGTTCACTCTCTGCAACAAAATTCCGAGGGTGTCCAAGAAGGTGGTGATGGTTGGAGCATTCGTGAGAATAATGAAGACGAGGGAACGAAGAAGAAGAAGACCAAAAAGAGGAAGAGGAAGGTTGAGGAGGACGTTGTGGCAAATGGGGTTGTGAAGGATGCAAAAAAGAAGAAATCAAAGAAAAGACCTGATAAGAAGAAGCGGAAGAAGGCGAAAACGGCGGAGAAAAAGGGTGATAATGCTGGAGATGATAAAACAGAGGCGTCGGAGTTAGCTAAGAGTAACGGCAGTGAACAAGATGGTGATGTTCCTACCAAAGTTTATGTTGGAGGAATTCCCTATTATTCAACCGAGGATGATATTCGAAGCTATTTTGAAGGCTGTGGCACAATAACAGAAGTTGATTCCATGAAGTTTCCTGAGAGTGGAAAATTTCGAGGGATTGCCATTATTAGTTTTAAGTTAACTGTATCTGAGACTGAAGCTGCTGCAAAACGAGCCTTGGCACTTGACGGATCTGACATGGGAGGGTTCTTTCTCAAAATCCAACCTTATAAAGCAACCCGAACCAGTAAAGCATCTAATTTTGCCCCAAAGCTGGTGGAGGGCTACAATAGAATCTATGTTGGAAATTTGCCTTGGGATATAACAGAGGATCAATTGAGGAAGCTATTCTCAGATTGTAGCATATCATCGATACGTTTTGGTATGGACAAGGAAACGGGAGAATTCCGGGGCTATGCCCATGTGGATTTCACTGACAGTAAGTCACTGAAAATGGCACTTACCTTGGACCAAAAGGTTCTGTGTGGGAGACCTGTTAGAATAACATGCGCGGTTCCTTTGAAGAAGGCAGGGAATCATACAGCTGACGCGCATACAGCCAACATGCCTATGAGCAACGGAACCAATAATGAGAAGGCAAGTGCCACGCCTACGAGCAACGGAACCAATAATGAGAAGGCAAGTACCACTGGAAGTGGAAAGCTGAAGAGGAGGACATGCTATGAGTGTGTAATATCTCTTAGACTCCGCAAATTCTGCTTGGTTGCCGAGAAAATTGGTTCATTTGTCCCACTGTTTGCTGTGTGA 1257 0.4463 MVLSNKKLKLRLRAELAQSQAANPDLSSDPQCSLKKFLDSAALKFRLSKREKRRKVHSLQQNSEGVQEGGDGWSIRENNEDEGTKKKKTKKRKRKVEEDVVANGVVKDAKKKKSKKRPDKKKRKKAKTAEKKGDNAGDDKTEASELAKSNGSEQDGDVPTKVYVGGIPYYSTEDDIRSYFEGCGTITEVDSMKFPESGKFRGIAIISFKLTVSETEAAAKRALALDGSDMGGFFLKIQPYKATRTSKASNFAPKLVEGYNRIYVGNLPWDITEDQLRKLFSDCSISSIRFGMDKETGEFRGYAHVDFTDSKSLKMALTLDQKVLCGRPVRITCAVPLKKAGNHTADAHTANMPMSNGTNNEKASATPTSNGTNNEKASTTGSGKLKRRTCYECVISLRLRKFCLVAEKIGSFVPLFAV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3329 418 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 262 329 IPR000504 GO:0003723
Bisa01g3329 418 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 162 235 IPR000504 GO:0003723
Bisa01g3329 418 SUPERFAMILY RNA-binding domain, RBD 152 246 IPR035979 GO:0003676
Bisa01g3329 418 MobiDBLite consensus disorder prediction 109 128 - -
Bisa01g3329 418 MobiDBLite consensus disorder prediction 348 382 - -
Bisa01g3329 418 MobiDBLite consensus disorder prediction 94 108 - -
Bisa01g3329 418 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 160 242 IPR000504 GO:0003723
Bisa01g3329 418 Gene3D - 254 344 IPR012677 -
Bisa01g3329 418 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 78 242 - -
Bisa01g3329 418 MobiDBLite consensus disorder prediction 129 146 - -
Bisa01g3329 418 MobiDBLite consensus disorder prediction 47 159 - -
Bisa01g3329 418 MobiDBLite consensus disorder prediction 344 382 - -
Bisa01g3329 418 SUPERFAMILY RNA-binding domain, RBD 255 338 IPR035979 GO:0003676
Bisa01g3329 418 SMART rrm1_1 161 238 IPR000504 GO:0003723
Bisa01g3329 418 SMART rrm1_1 261 332 IPR000504 GO:0003723
Bisa01g3329 418 CDD RRM1_PHIP1 162 238 IPR034361 -
Bisa01g3329 418 Gene3D - 46 250 IPR012677 -
Bisa01g3329 418 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 260 336 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3329 Bisa-ChrBisa01 77764888 77769391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3329 160 334 Eukaryotic Initiation Factors Gene Family AT2G36660 26.486 2.31e-06 47.8