Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3322 ATGAGTTCAACATGGTTATGGTCTAGGCTTATAATGTCTGCGTCTCCTCCTTCAGCTGCATTCCTGCGTCTGGTCTGCCACTGCCGCCGCCCCCTCAACTGCGTCTACCGACTGCCACTGCCATTGCCATTGCAAGTGTTCAATCCTTCAGTCCCTCACCCCTCAGTCTCACACTCTAAGGCCTCTGCTGTGTTTGGTCTGCCATTGCCACTGTTCCACCCCCACACCCGGCTTCTTCATCTGGACTTCAAACTCGGCTTACCCTTCTGCAATCTCTTCCTCTGCTCTCACTATCAGATGCCTTCAAAGACAAAGAAGCATAACAAGGCACAGACAAGGGTATCGACTTCTAAAGTGGCCACTCCTCGTACGCCATCACAGACACCTAACAGAGACTCAGAAGTTAGTGAAGAAGAACTTATCCTTTCTTGTGAAGAAGCCTCAAAAAAATTCCCATCTTTCATTGGAAAATCTGCTTTCATCGGTGATGTCAGTGATGTTGAGCCTAGTTCCAAAGGCTTCAAAATTTGGCTGTCGGAGCCTTCAATGGTTTCTTTTTCACTTGCCCCTGGTTCAATTGTGTCGGTGTCAATTGCTTCTTCAAGAAAGAAAAATTTGGAATTGGATAGCTTTCCCCTCAAATCATTAGCTAAAGAATGTGCCGGATGCTATGGATTGGATGGGAAGATGTCAGATCATGGTGCGGGAAATTACTTTGCTCTTGCAACAGTTTTTCCTTCTAGTAAGGTTTTGAAGAATGAAGTACGAATCTCATCAGATCTTTCTTTTACCATGGGTTGTCCGAGTTTGGGCACATTTGTGTTTGTATATCCAGTGCAGAACCAATACTTATCTTGTCTTGCAAATGGGAACAAGGAACCACATTTTACCAAAGATAATAGTCTGGTTGTGTATAATTGCAAGGAATTGTATCTTCAGTTGGCTCCTTCGAAGAATGGATTACCCATGAAAATTAATAACAATTCCTCAATGGACTTCTTTACAGCGAAATCCCAGGATCGATCTGAGAATGAAGATGTTGCTTCTCCAAGAACACCTAATGTATTAAAGTCGTCTAATTCTAGTGAGTTATCTTCTTCAATATTTGAAGATTCATCTTCTAGTGTACCTAGTCAGAAGAATCAATCATTGGTTTCATTTGATGTTAGGGAGGCATTGGGGGATGAAAGCACCAAGAAACTTCTGCAGACATGTGCAGCTTCATGGTTGTATTCCCGTTGCTTACTGCTAGGGAATCTTGTGACCATCCAAATATTTTCAGAGCTGTGCGTATTCCAAGTAATAGGAGCTAAAAAGGTGCCAGTAGATAGATTTAATCATGATTCATCAAATGGAAGTAGTAATTTGGACTCCGAGGATTCTGATATAGCAGAGCTTAAAAATCAGGCTATCATTGTCAACCGTGAAACAAAGGTATCTTTATCTTTGCCATCAAATGTGGCATGTAATGAGCTGATTCAAAGAGATTCGACTGAGCTGAAACTCAAATGGAAGGGCGCCAATGCTAGCTTACCCAATAATATTTCAAAATTAGGTGGTCTGTCTAAAGAATATGAATTTTTGAAGGGTATAATTTTGTCATCAGTAAAAAATGCTCTATCAAGCTTTGGCTTACGAACTACAAAAGGAGTCCTTCTACATGGTCCGCCTGGAACAGGGAAAACCTCCCTGGCTTATGTATGTGCTCATGATGTGGGGGTCAATATTTTCCCAATAAATGGACCTGAAATTGTAAGCCAATATTATGGTGAAAGTGAGCAAGCGCTGTATGAGATTTTTGATTCAGCCATTCAAGCTGCACCTGCTGTGGTTTTTATTGATGAGTTGGATGCTATTGCCTCTGCTAGGAAAGATGGTGGTGACGAGCTATCTCAGAGAATGGTTGCAACTTTATTGAATCTAATGGATGGAATTAGTAGAACTGAAGGACTACTTGTTATTGCTGCAACCAACATGCCTGACAATATTGAGCCAGCTCTGAGGCGGCCTGGAAGATTTGACAAGGAAATTGAAATTGGTGTACCATCACCCAACCAACGATTGGATATGTTGCTCACTCTTCTCAATGAAGTGGATCACAGTCTTTCAGAGTTGCAGATTGAACACCTGGCCACAGTCACACATGGGTTTGTGGGTGCTGACCTAGCCGCCCTTTGCAATGAGGCAGCCTTGGTTTGTCTTAGACGTTATGTTAATTTTAAGAAGGATTGTGATGATTTCTGCTATACTGGAACATCCATTCCATGTAAAGGCTATTTTGAGGATATAGCAGAGCAACCTGCACTGCTGAAAGGTGCAAGAAACTTGAAAGATTATTCAGCCCAGCCATCTTCATCTGTCTCAAATTTATTACTGGCCTCCAACTTCAATATGGAAATAATTCCTGATAGTGGTGAAGAAGAGCATATTTTGAAAGTAACTTATGAAGATTTTCAGAAGGCGAGAATGAAAGTAAGACCCAGTGCCATGAGAGAGGTAATCCTGGAAGTTCCAAAGGTTAAGTGGGAAGATGTTGGTGGCCAAAAGGAGGTCAAAGCCCAATTGATGGAAGCAGTGGAATGGCCCCAGAAGCACCATGATGCATTCAAGCGTATTGGGACTCACCCTCCAAAAGGCGTGTTGATGTTTGGTCCTCCAGGTTGCAGCAAAACCCTCATGGCACGCGCAGTCGCTTCTGAAGCAGGGCTTAATTTTCTGGCTGTTAAGGGTCCAGAGCTCTTCAGCAAATGGGTCGGTGAATCTGAGAAGGCTGTCAGATCTTTGTTTGCAAAAGCAAGGGAAAATTCCCCATCAATTGTGTTTTTTGATGAAATAGATGGTCTTGCTGTGATTCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAACTTCTTGTTGAAATGGATGGTCTGCATCAGAGAGTTAATGTTACTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGACCGTATGCTATATGTGGGACCTCCAAACGAGGTGGATAGGGAAGAGATATTCTGCATCCATTTGCATAAAATTCCATGTGGTTCTGATGTTAACATAAAGGAACTTGCTTCTATTACTGCTGGTTATACTGGTGCTGATATATCACTAGTATGTCGGGAGGCAGCTATTGCAGCAATTGAGGAGAGCCTGAATGCTTCAGTAATAACAATGAAGCATTTGAAGACAGCAATTAAACAGGTCCAGCCATCAGAGATTCAGTCTTACCAGCAGTTGTCAGCTAAATTTCAACGGGCTGTTAATTCCTGTGATATAAAACACGAAGCCAGTCATATGCAGTGTTCAAGCAGATCTTCTTGGTTCTGCATTTGGTAG 3387 0.4252 MSSTWLWSRLIMSASPPSAAFLRLVCHCRRPLNCVYRLPLPLPLQVFNPSVPHPSVSHSKASAVFGLPLPLFHPHTRLLHLDFKLGLPFCNLFLCSHYQMPSKTKKHNKAQTRVSTSKVATPRTPSQTPNRDSEVSEEELILSCEEASKKFPSFIGKSAFIGDVSDVEPSSKGFKIWLSEPSMVSFSLAPGSIVSVSIASSRKKNLELDSFPLKSLAKECAGCYGLDGKMSDHGAGNYFALATVFPSSKVLKNEVRISSDLSFTMGCPSLGTFVFVYPVQNQYLSCLANGNKEPHFTKDNSLVVYNCKELYLQLAPSKNGLPMKINNNSSMDFFTAKSQDRSENEDVASPRTPNVLKSSNSSELSSSIFEDSSSSVPSQKNQSLVSFDVREALGDESTKKLLQTCAASWLYSRCLLLGNLVTIQIFSELCVFQVIGAKKVPVDRFNHDSSNGSSNLDSEDSDIAELKNQAIIVNRETKVSLSLPSNVACNELIQRDSTELKLKWKGANASLPNNISKLGGLSKEYEFLKGIILSSVKNALSSFGLRTTKGVLLHGPPGTGKTSLAYVCAHDVGVNIFPINGPEIVSQYYGESEQALYEIFDSAIQAAPAVVFIDELDAIASARKDGGDELSQRMVATLLNLMDGISRTEGLLVIAATNMPDNIEPALRRPGRFDKEIEIGVPSPNQRLDMLLTLLNEVDHSLSELQIEHLATVTHGFVGADLAALCNEAALVCLRRYVNFKKDCDDFCYTGTSIPCKGYFEDIAEQPALLKGARNLKDYSAQPSSSVSNLLLASNFNMEIIPDSGEEEHILKVTYEDFQKARMKVRPSAMREVILEVPKVKWEDVGGQKEVKAQLMEAVEWPQKHHDAFKRIGTHPPKGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARENSPSIVFFDEIDGLAVIRGKESDGVSVSDRVMSQLLVEMDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRMLYVGPPNEVDREEIFCIHLHKIPCGSDVNIKELASITAGYTGADISLVCREAAIAAIEESLNASVITMKHLKTAIKQVQPSEIQSYQQLSAKFQRAVNSCDIKHEASHMQCSSRSSWFCIW 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3322 1128 CDD RecA-like_CDC48_r2-like 851 1010 - -
Bisa01g3322 1128 PANTHER AAA-FAMILY ATPASE 166 1101 - -
Bisa01g3322 1128 Gene3D - 841 1099 IPR027417 -
Bisa01g3322 1128 MobiDBLite consensus disorder prediction 113 131 - -
Bisa01g3322 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 740 IPR027417 -
Bisa01g3322 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 838 1089 IPR027417 -
Bisa01g3322 1128 Pfam AAA+ lid domain 1034 1079 IPR041569 -
Bisa01g3322 1128 Pfam AAA+ lid domain 706 739 IPR041569 -
Bisa01g3322 1128 FunFam Calmodulin-interacting protein 111 682 840 - -
Bisa01g3322 1128 Pfam ATPase family associated with various cellular activities (AAA) 880 1011 IPR003959 GO:0005524|GO:0016887
Bisa01g3322 1128 Pfam ATPase family associated with various cellular activities (AAA) 551 680 IPR003959 GO:0005524|GO:0016887
Bisa01g3322 1128 Gene3D - 1013 1098 - -
Bisa01g3322 1128 Gene3D - 505 682 IPR027417 -
Bisa01g3322 1128 MobiDBLite consensus disorder prediction 105 137 - -
Bisa01g3322 1128 SMART AAA_5 547 683 IPR003593 GO:0016887
Bisa01g3322 1128 SMART AAA_5 876 1014 IPR003593 GO:0016887
Bisa01g3322 1128 Gene3D - 683 840 - -
Bisa01g3322 1128 FunFam Putative vesicular transport protein (CDC48) 503 680 - -
Bisa01g3322 1128 ProSitePatterns AAA-protein family signature. 982 1000 IPR003960 GO:0005524|GO:0016887
Bisa01g3322 1128 FunFam spermatogenesis-associated protein 5-like protein 1 1013 1096 - -
Bisa01g3322 1128 FunFam calmodulin-interacting protein 111 isoform X1 837 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3322 Bisa-ChrBisa01 77226440 77248694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3322 100 1124 Calmodulin-binding Proteins AT3G56690 56.848 0.0 1030