Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3307 ATGAAAAACCACGTAAAGATAGAGCATCCAACTTGGCAACAGTATGAACATGAATGTAGAGCAGCGGAAAATAAGCCCAAATCAGCCCGATATATATATTTAATACAAATCCTCGGTACGATTTCATGTCCCTCCCATTTTGCGCTAGGGTTTTGCTTCGAACAAGAAGGGCAAAAGGCGCCGATCCAGAAAGCTCCGGAGAACACAGCAATGGCGAGGATCAAGGTTCATGAGCTAAGGCAGAAGACGAAGGCCGAGCTGCTCAACCAGCTCAAGGATCTCAAGGCTGAGCTTGCTTTGCTACGTGTTGCTAAAGTCACCGGCGGTGCACCCAACAAACTATCCAAGATAAAGGTGGTGAGGTTGTCCATAGCTCAGGTTTTGACCGTGATATCTCAGAAGCAGAAGGCTGCATTAAGGGAAGCATATAAGAATAAGAAGTACTTGCCTCTTGATCTGCGTCCTAAGAAAACAAGGGCTATTCGCAGAAGGCTTACCAAGCACCAGGCATCGTTGAAGACTGAACGAGAGAAGAAGAAGGATACATACTTTCCAATGAGGAAATTTGCAATCAAGGTGTAG 582 0.457 MKNHVKIEHPTWQQYEHECRAAENKPKSARYIYLIQILGTISCPSHFALGFCFEQEGQKAPIQKAPENTAMARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDTYFPMRKFAIKV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3307 193 Gene3D - 71 147 IPR036049 GO:0003735|GO:0005840|GO:0006412
Bisa01g3307 193 SUPERFAMILY Ribosomal protein L29 (L29p) 74 135 IPR036049 GO:0003735|GO:0005840|GO:0006412
Bisa01g3307 193 PANTHER 60S RIBOSOMAL PROTEIN L35 71 193 IPR045059 GO:0000463|GO:0022625
Bisa01g3307 193 FunFam 60S ribosomal protein L35 71 147 - -
Bisa01g3307 193 Pfam Ribosomal L29 protein 78 134 IPR001854 GO:0003735|GO:0005840|GO:0006412
Bisa01g3307 193 NCBIfam 50S ribosomal protein L29 78 134 IPR001854 GO:0003735|GO:0005840|GO:0006412
Bisa01g3307 193 CDD Ribosomal_L29_HIP 78 134 - -
Bisa01g3307 193 FunFam 60S ribosomal protein L35 148 193 - -
Bisa01g3307 193 Coils Coil 77 104 - -
Bisa01g3307 193 Gene3D - 148 193 - -
Bisa01g3307 193 Hamap 50S ribosomal protein L29 [rpmC]. 74 134 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3307 Bisa-ChrBisa01 76801834 76805933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3307 71 193 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 88.618 4.26e-72 212