Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3306 ATGACGGTTTGTTTTGTCCCCAAACAACCAGAAGCTGATTTCTCTGAGGTCTCGACGGAGGCAAATATGGCGTCGCTGTTACCATACAACGATGTTGATTTCAACTTGAGGGCAATGGCGGGTCGAGCGGAAGGTTTTGGTCGCTTCTCCATCGGTGGGCTCCACGGCCCTCTATATTTTGTCACCACCCTTGCTGATGATGGTCCAGGATCCCTTCGCGATGGCTGTCGTAGAAGGGAGCCACTATGGATTGTTTTTGAAGTTTCTGGTACAATTCATCTATCATCATACCTGAGTGTATCATCTTATAAGACAATAGATGGTCGAGGCCAGAGGATAAAGCTCACAGGAAAAGGCTTAAGGCTGAAAGAGTGTGAGCATATTATTGTATGCAACCTTCTGTTTGAAGGTGGTAGGGGTCATGATGTTGATGGCATTCAAATAAAACCAAATTCCAAGCACATATGGATAGATCGCTGCAGTCTTCGTGACTATGATGATGGGCTTATAGACATTACAAGACAAAGCACAGATATTACTATATCAAGATGTTACTTTGCACAACATGACAAGACCATGCTAATTGGAGCTGACCCATCTCACATTGGCGATAGATGCATCCGGGTGACAATTCATCATTGTTTCTTTGATGGGACACGGCAGAGACACCCTCGTGTTAGATTTGGCAAAGTTCATCTTTACAACAATTACACCAGGAACTGGGGTATATATGCTGTTTGTGCTAGTGTTGAGTCTCAGATATACTCTCATTGCAACATATATGAAGCAGGAAATAAGAAAAAGACATTTGAATTTTATACAGAGAAGGCTGCTGATAAGGAAGAGCAGAAATCTGGCTTCATAATATCTGAAGGAGACATATTCCTGAATGGTGCCGTACCGAGCTTACGAACAGAATACAAAGAAGGATGCATGTACCATCCTAGTGAATATTATCCAACTTGGACAATGGAAGTGCCCTCACCTTCTTTTAAAGATGTTCTTCAATTATGTACAGGTTGGCAATCAATTTCTAGGCCTGTAGAAAATCTTGTTCGTTATTAG 1065 0.4225 MTVCFVPKQPEADFSEVSTEANMASLLPYNDVDFNLRAMAGRAEGFGRFSIGGLHGPLYFVTTLADDGPGSLRDGCRRREPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHIIVCNLLFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSHCNIYEAGNKKKTFEFYTEKAADKEEQKSGFIISEGDIFLNGAVPSLRTEYKEGCMYHPSEYYPTWTMEVPSPSFKDVLQLCTGWQSISRPVENLVRY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3306 354 Pfam Pectate lyase 98 259 IPR002022 -
Bisa01g3306 354 SUPERFAMILY Pectin lyase-like 40 314 IPR011050 -
Bisa01g3306 354 Gene3D - 29 328 IPR012334 -
Bisa01g3306 354 PANTHER PECTATE LYASE 18-RELATED 32 305 IPR045032 GO:0030570
Bisa01g3306 354 SMART amb_all 69 267 IPR002022 -
Bisa01g3306 354 PRINTS Pollen allergen Amb family signature 244 263 IPR018082 -
Bisa01g3306 354 PRINTS Pollen allergen Amb family signature 222 241 IPR018082 -
Bisa01g3306 354 PRINTS Pollen allergen Amb family signature 42 59 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3306 Bisa-ChrBisa01 76777783 76782763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3306 64 352 Polysaccharide Lyase AT3G55140 80.277 0.0 506