Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3299 ATGATCGCCCAAAAGGACCCTGCAGGCTCTGCCACAGCGGAGTCCCAAGCCTCTTCCACAGCCTCTGCGACAGCGGAGTCCAAAGCCGCTCCCGCTGCCTCCGCCACAGCCTCCGCTTCTTCCAATGCCACAGATTCATCCCGTTCTTCCCTCACTCCGCTTTTCGCCGATGCCGATAAGCCCACCCCACCACCGGCCCCAAACATCGTGATGTCCTCCTCCAAGGATCCCAATTCTCTCTTCAGCGGCGGTGGCGTCAGCTGTCTGTCGAGAAGTCGGAACGGAAAGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTCTATGAGACAAGTATATCAGAGATTGATGGTCAGGTGGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCTCGGACTGCTGAATACCTGAAAAAAAATCTCTTTAAAAATATAAGTAGCCATCCTGACTTTATCAAAGACACGAAGACAGCTATTGTTGAAGCATTTAAACAGACAGATGTTGATTATCTCAAAGAGGAAAAGGGTTATCATAGGGATGCTGGGTCCACTGCATCAACAGCTGTATTGTTGGGTGACCGGATTGTTGTTGCCAATGTTGGTGATTCCAGAGTAGTTGCTTCTAGAGCTGGTTCAGCTGTCCCTTTGTCTATTGATCACAAACCCGATAGATCTGATGAACGTACGAGGATTGAACAGGCTGGGGGATTCATCATTTGGGCAGGGACATGGCGGGTTGGTGGTGTTCTCGCTGTTTCCCGTGCTTTTGGTGACAAACTTCTTAAGCCATATGTTGTTGCTGATCCTGAAATTCAGGAAGAAGAGATCGATGATGTAGATTTTATAATAATCGCTAGTGATGGACTTTGGAATGTCATATCAAACAAGGAAGCTGTGGCTTTAGTTCAAAACATCACAGATGCAGAGATGGCATCGAGAGAACTTATTAAAGAAGCTTACACACGAGGAAGCTCAGACAACATTACTTGTGTAGTTGTTCGATTTGATATATCTTGA 1041 0.4649 MIAQKDPAGSATAESQASSTASATAESKAAPAASATASASSNATDSSRSSLTPLFADADKPTPPPAPNIVMSSSKDPNSLFSGGGVSCLSRSRNGKFSYGYSSFKGKRSSMEDFYETSISEIDGQVVAFFGVFDGHGGSRTAEYLKKNLFKNISSHPDFIKDTKTAIVEAFKQTDVDYLKEEKGYHRDAGSTASTAVLLGDRIVVANVGDSRVVASRAGSAVPLSIDHKPDRSDERTRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDDVDFIIIASDGLWNVISNKEAVALVQNITDAEMASRELIKEAYTRGSSDNITCVVVRFDIS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3299 346 CDD PP2Cc 97 343 IPR001932 -
Bisa01g3299 346 Gene3D - 89 345 IPR036457 -
Bisa01g3299 346 Pfam Protein phosphatase 2C 99 336 IPR001932 -
Bisa01g3299 346 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Bisa01g3299 346 PANTHER PROTEIN PHOSPHATASE 48 343 IPR015655 GO:0004722|GO:0006470
Bisa01g3299 346 MobiDBLite consensus disorder prediction 9 53 - -
Bisa01g3299 346 SMART PP2C_4 88 341 IPR001932 -
Bisa01g3299 346 MobiDBLite consensus disorder prediction 1 76 - -
Bisa01g3299 346 FunFam probable protein phosphatase 2C 59 90 345 - -
Bisa01g3299 346 SUPERFAMILY PP2C-like 90 344 IPR036457 -
Bisa01g3299 346 ProSiteProfiles PPM-type phosphatase domain profile. 98 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3299 Bisa-ChrBisa01 76566175 76579691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3299 70 346 PP2C-type Phosphatase Gene Family AT1G43900 72.924 1.05e-154 437