Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3270 ATGCTGTTGCAAGCTCGCGCTTCAAACCTTTGGTGGTCTCTGCGTCCTCTTTTCAACGCCTATCAGGCTCTGTCTTCCTCCTTTCTCCTCAACTTTTCTTCTTTAAAGCAACCTCAGGTTTTTAGCGTCTTGGACGATGATTGTTATGGCTTCTTGCCATGGTTGGAGCGAAAAGCTGGTTCTAGAATTTCATCAGCGCTTTCAATTGGGAAATCTTCTTATGGCAGGTCTCTGTTTGCTTCTAGGATAATACACAGTGGAGAATGCATTTTAAAGATTCCTTATAGCGTGCAAATAACTGTGGATAACTTAGTCCCAGAAGTCAGATCTTTAATCAGTGACAAAGGTGAAAATATTGCAAAACTTGCTCTTGTTATTTTGGTGGAGCAGAAATTGGGTCAGGACTCAGAGTGGGACCCATATATCAGCTGCCTTCCTCAGCAAGGGCAGCTGCATAATACGATATTTTGGAGTGAGTATGAGTTGGACATGATTCGTGAAAGCTCAGTATATCAGGAAACAATCAACCAAAAGTCTCAAATTGAGAGGGACTTTTTGGCAATGAGACCAGTTATCAAAAGCTTCCCTCAAAGTTTTGGAGAAATTACTTTTGAGGATTTCATGCATGCATGTACAATAGTTGGTTCTCGAGCATGGGGAAGCATGAAGGGTTTATCTCTGATTCCATTTGCAGATTTCTTAAATCATGATGGGGTTTCAGAAGCAATTGTAATGAGTGATGACGACAAACAATACTCAGAAGTCATTGCTGATCGTGATTATGCTCCTGGTGAACAGGTACTAATACGATATGGAAAATTTTCTAATGCTACCTTGATGCTGGACTTTGGATTTACACTTCCATACAACATTTACGATGAGGTTCAGATCCACCTTGATATACCTAAGCATGATCCGCTGCATGACCTGAAGATGGAACTCTTGCAGCAATATTTCGTGCCTACTACCAAAGATGCGAAAGGCTTGAACAATTCTTTGAATTCTTTCACAATCAAGGATGTGATGTCTGCCAGAGGGAAAGGGAAGGGTCTTCCACAATCTCTTCGTGCATTTGCCCGTGTTCTTTCTTGCACCTGTCCTCAAGAACTTAATGATTTGGCCATGGAGGCTGCACAAACTGATGGTAGACTGGCTAGGCGTCCTTTGCGCAATATTGACAAAGAGATACAAGCACACCTGATGTTGTCATCATTATTCACCCGATTAACTGATGAGCGCTCTGAAGCTATTCAGTCGCTGGAGTTTTCCAATTCTTCCTCCATTTGTGCAAAACTTCCCATTAGAAGTAGAATGGCTCGGGATCTTCTATGTGGTGAACTTCGCATTCTCAGATCTGCTTCTGCCTGGTTGGAGAATTACTGTTTTTCCTTGACTGGACAATCTATTTGA 1410 0.4199 MLLQARASNLWWSLRPLFNAYQALSSSFLLNFSSLKQPQVFSVLDDDCYGFLPWLERKAGSRISSALSIGKSSYGRSLFASRIIHSGECILKIPYSVQITVDNLVPEVRSLISDKGENIAKLALVILVEQKLGQDSEWDPYISCLPQQGQLHNTIFWSEYELDMIRESSVYQETINQKSQIERDFLAMRPVIKSFPQSFGEITFEDFMHACTIVGSRAWGSMKGLSLIPFADFLNHDGVSEAIVMSDDDKQYSEVIADRDYAPGEQVLIRYGKFSNATLMLDFGFTLPYNIYDEVQIHLDIPKHDPLHDLKMELLQQYFVPTTKDAKGLNNSLNSFTIKDVMSARGKGKGLPQSLRAFARVLSCTCPQELNDLAMEAAQTDGRLARRPLRNIDKEIQAHLMLSSLFTRLTDERSEAIQSLEFSNSSSICAKLPIRSRMARDLLCGELRILRSASAWLENYCFSLTGQSI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3270 469 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 44 285 - -
Bisa01g3270 469 SUPERFAMILY SET domain 49 290 IPR046341 -
Bisa01g3270 469 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 48 398 - -
Bisa01g3270 469 Pfam SET domain 75 272 IPR001214 GO:0005515
Bisa01g3270 469 Pfam Rubisco LSMT substrate-binding 303 450 IPR015353 -
Bisa01g3270 469 Gene3D - 288 461 IPR036464 -
Bisa01g3270 469 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 297 461 IPR036464 -
Bisa01g3270 469 Gene3D set domain protein methyltransferase, domain 1 45 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3270 Bisa-ChrBisa01 75244017 75259703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3270 122 265 NAC Transcription Factor Family AT3G56570 25.166 2.32e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa01g3270 SET 6.7e-12 No_clan