Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3255 ATGGGGCTAGTTCAGATGAGCAACGGTGAGGGTTCTGTGATGCCAAAACGGCCAGCAGAACTCAATCAACATATTCAAAACGAACAAAAGGTTAGGGGTGGGGTTACTGGGGAAGGGCAAGAACTATCCGCGGAGGATGAGTCGCGGATCAACGACAATATCGGAGATGAAAACGACGGAAGAATGGAGGTTCTTAAGACTGAGAACTGCATCAATCAGGTGGACCTTATAAGAGAGGGTACGCAGCAACATACCCAAGGGCCTCTGGTTCGCTGGGAGAGGTTCTTACCAGTTAGATCATTGAAGGTCTTACTGGTTGAGAATGATGATGCAACTCGAAATGTGCTCTTTGCATTGCTTCGGAACTGTGGTTATGAAGTTGTGGCTGTTGTAAACGGTCTGCAAGCTTGGAAAGTCCTTGAAGATCTGACTTCTAATATTGATCTCGTTTTGACTGAGGTATTCTTGTTAGGTTTAACAGGCATTGGCCTCCTATCCAAGATTATGAGCCACAAAACTTGCAGGAGTATTCCTGTGATTATGATGTCATCTCATGATTCTGTAAGTGTAGTATTTAAGTGTTTGTCCAAGGGTGCAGTTGACTTTTTAGTCAAGCCTATACGAAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAAATGCAATGGGTCTAGTGGTAGTGGAAGTGAAAGTTGTGTGCGCACTCAGAAGTCTTTGAAGTCAGAAAGTGGAGAACATTCAGACAACAAGTGTGGCAACTATGATGATTATGATATTGGAAGTACTGGCTTGAACGCAAGAGATAGGAGTGATAATGGAAGTGGCACCCAGAATTCATGGACCAAGATGGCAGTTGAAGTTGATAGCCCAGGACCAATGTCCCCGTGGGAACAGCTGGGTGATCCACCTGCTGGTAGCACTTGCACCCAAGTTATTCATTCAATGCCTGATACCATTCCCAACAATCCGCTGCCTGCAACAAAGGATTGCCAGACACAGCATCATGAGCTTGCTTTGGACATGGTGATGACAGACATAGATTTGAAGATAGCAGCACCTAGATCAATTCCAGCCCTGCAGCCTCGTGAAGAACCTGCCAATTTAACCGCTTGTAACAACAAGAAAACCTCTGAGAAAGAAAAAATGGATAAAGAGCAACAAACAGTGCAGGTTATTGATCTGAATAGTAGTACGGAGAGATCAATTGTGGAATGTAAAAATCAAGGAACTGATCCAACAGGTGTTGTCACCAATAGTAATTCTGATGCGCCCTTAGAAATTCAAGTCTTGGACAACTCAAATGGCATGGTCTCTAATGTGAAAGATATGAATAATGTGTGTGGCAACAAGGAAGTGCCTTCTTCGTTCGAGGTCGGTTCAAAGAGCTTGAATGGCATGGCAGATCTTGAGTGTAGTGCGCAAGATCAAAATATTTTAAAGCAATCAAACCGTTCTGCATTCTCAAGGTACATCTCAGCATCTCATCAAGCTCCAACAGGGAATGTGGGGAGCTGTTCACCCATTGATAATAGCTCAGAGGCAGCAAAAACAGAATCAGCACAAGGCATTGGGAATAATTACTTCAACTCCATCCCTCCCAATCAGCACTCCAATGGAAGTAACAACAACAATGACATGGGCTCTACCACCAACAATAATGCCTTCACCAAACCTAATTCTGAAGCCATTGATAAGCCAAGGCACAAACCAACCATCAAATATCTACAGCCCTCTTCAGCTTTCCATCCTCTGCAAAATGTGTCTCCTCGACCTGGGGTAGTTCAAGAAAATGGTGATAAGCAACATGTTGAAGTGCAGCATCACCACCACCATCACCTCCATCACCATCACCACATGCATAATATGGTTGCTCACCAACTAGTCAACCATGATGGTCGGTCTCTGCGAAACAAGATAGGCATAGCCACATCTCTTCGTGAAAACTCGACCAATCCCTTGAGTTCAGAAATCAAAACTGATGCTGCCAACCAAAGTATAAATGGAAGTGCTTTTGGGAGTCACCAAGGGAGCAATATTGTCCATGTTGGGAACAACGGCACTTTACTAGGCAGAGCAAGAAACTCGGAAAATGATAATAGAAAATCTGAGAAAGAGGGAACGACAAGTGGCTTAAGATTTGAGGCTCCAAATGCAGCTATGGAAAATCGGTTTTCACAAAGGGAAGCTGCTTTGAACAAATTTCGCCAGAAGAGGAAAGAGAGATGCTTTGAGAAAAAGGTTCGATACCAGAGCAGGAAGAAACTAGCAGAACAAAGGCCACGGGTACGTGGACAATTTGTACGTCATGCAGTTGATGAAAACAAAGAAAAATACTCTCACCAATGA 2352 0.4384 MGLVQMSNGEGSVMPKRPAELNQHIQNEQKVRGGVTGEGQELSAEDESRINDNIGDENDGRMEVLKTENCINQVDLIREGTQQHTQGPLVRWERFLPVRSLKVLLVENDDATRNVLFALLRNCGYEVVAVVNGLQAWKVLEDLTSNIDLVLTEVFLLGLTGIGLLSKIMSHKTCRSIPVIMMSSHDSVSVVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRKCNGSSGSGSESCVRTQKSLKSESGEHSDNKCGNYDDYDIGSTGLNARDRSDNGSGTQNSWTKMAVEVDSPGPMSPWEQLGDPPAGSTCTQVIHSMPDTIPNNPLPATKDCQTQHHELALDMVMTDIDLKIAAPRSIPALQPREEPANLTACNNKKTSEKEKMDKEQQTVQVIDLNSSTERSIVECKNQGTDPTGVVTNSNSDAPLEIQVLDNSNGMVSNVKDMNNVCGNKEVPSSFEVGSKSLNGMADLECSAQDQNILKQSNRSAFSRYISASHQAPTGNVGSCSPIDNSSEAAKTESAQGIGNNYFNSIPPNQHSNGSNNNNDMGSTTNNNAFTKPNSEAIDKPRHKPTIKYLQPSSAFHPLQNVSPRPGVVQENGDKQHVEVQHHHHHHLHHHHHMHNMVAHQLVNHDGRSLRNKIGIATSLRENSTNPLSSEIKTDAANQSINGSAFGSHQGSNIVHVGNNGTLLGRARNSENDNRKSEKEGTTSGLRFEAPNAAMENRFSQREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRHAVDENKEKYSHQ 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3255 783 PANTHER TWO-COMPONENT RESPONSE REGULATOR 101 327 IPR045279 GO:0009736
Bisa01g3255 783 SMART REC_2 101 216 IPR001789 GO:0000160
Bisa01g3255 783 Coils Coil 779 783 - -
Bisa01g3255 783 MobiDBLite consensus disorder prediction 42 58 - -
Bisa01g3255 783 ProSiteProfiles CCT domain profile. 729 771 IPR010402 GO:0005515
Bisa01g3255 783 SUPERFAMILY CheY-like 99 222 IPR011006 -
Bisa01g3255 783 MobiDBLite consensus disorder prediction 22 58 - -
Bisa01g3255 783 Pfam CCT motif 729 770 IPR010402 GO:0005515
Bisa01g3255 783 Gene3D - 100 248 - -
Bisa01g3255 783 MobiDBLite consensus disorder prediction 498 561 - -
Bisa01g3255 783 MobiDBLite consensus disorder prediction 696 710 - -
Bisa01g3255 783 FunFam Two-component response regulator-like PRR37 101 258 - -
Bisa01g3255 783 ProSiteProfiles Response regulatory domain profile. 102 220 IPR001789 GO:0000160
Bisa01g3255 783 MobiDBLite consensus disorder prediction 498 569 - -
Bisa01g3255 783 Pfam Response regulator receiver domain 103 214 IPR001789 GO:0000160
Bisa01g3255 783 MobiDBLite consensus disorder prediction 692 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3255 Bisa-ChrBisa01 74754413 74805714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3255 89 305 Response Regulator Gene Family AT5G60100 63.348 3.13e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bisa01g3255 Response_reg 7.3e-19 CL0304