Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3242 ATGGGGAATACTTGTGTTGGTCCGAGCATTTCCAAAAATGGTTTTCTCCAATCAGTTTCTGCAGCTATGTGGAAATCACGAACACTCGATGAGGAATCAGTTTCTAATGGAGGAACTGTAAATGAGGAAACAACTAGAGAACCTGAATCATCGTCCATGCCCGTCCAAAGCAAACCTCCTGAGCAAATGACTATGCCAAAACCAGAAACCAAACCAGAGCAGGACCAGAAGCAGAAATCCCAGGAGCCTAAACCCAAGAGGCCTGCATCTATTAAAAGGGTGTCTAGTGCGGGGCTTCGCGTTGGTTCTGTATTACAAACAAATAATGGTAATCTGAAGGAGTTCTATATTGTGGGAAGAAAACTCGGACAGGGTCAGTTTGGGACAACGTTTTTATGCGTGGAGAAGGCAACCGGTAATGAGTATGCCTGTAAATCTATGGCAAAGAGGAAGATGGTAACTGATGAGGATGTTGAGGACGTGAGAAGAGAAATTCAGATAATGCACCACTTGGCTGGGCATCCTAATGTTATATCCATCAAAGGTGCTTATGAGGATGCAGTGGCAGTTCATGTTGTGATGGAGTTATGTGCAGGTGGTGAACTTTTTGACAGAATTATTCAGCGGGGGCATTATACGGAAAGAAAGGCAGCTGAACTCATTAGGACTATAGTTGGGGTGGTGGAAGCATGTCATTCTCTTGGTGTGATGCACAGAGATCTTAAACCTGAGAACTTTCTCTTTGTCAATCAGCAGGAGGATTCTCTTCTCAAAACCATTGACTTTGGACTATCTGTTTTTTTTAAGCCAGGCGAAGTATTTGCTGATGTGGTTGGCAGCCCATACTATGTTGCACCAGAAATTTTGCGAAAGCGTTATGGTCCAGAAGCAGATGTTTGGAGTGCTGGGGTGATCCTTTACATTCTTTTGAGTGGAGTGCCTCCCTTTTGGGCTGAAACTGAGCAAGGAATATTTGAAGAAGTTCTGCGTGGTGATCTTGACTTTTCATCTGAACCTTGGCCTCACATTTCTGAAAGTGCCAAAGATTTAGTAAGGAAAATGCTTATTCGTGATCCCAGAAGGCGGCTGACTGCACATCAAGTTTTATGTCATCCTTGGATTCAAGTTGATGGTCTAGCTCCTGACAAACCACTTGATTCTGCTGTATTAAGTCGCCTGAAGCAGTTTTCTGCTATGAACAGGTTCAAGAAAATGGCTCTTAGAGTTATTGCAGAAAACTTATCTGAAGAAGAAATAGCTGGCTTGAGAGAAATGTTCAAGATGATAGATGCAGACAACAGTGGTCAAATTACATTTGATGAGCTTAAGGCTGGTTTGAAAAGAGTGGGAGCTAATCTTAAGGAATCTGAAATTTATGATTTGATGCAAGCAGCTGATGTTGACAATAGTGGAACAATTGATTATGGGGAGTTTATCGCTGCAACGTTGCATCTAAACAAGATTGAAAGAGAAGATCATCTTTTTGCAGCCTTTTCCTATTTTGATAAGGATGGAAGTGGCTACATTACTCAAGATGAACTTCAACAAGCTTGTGTGGAGTTTGGGGTAGAAGATCTCCGCTTGGAAGAGATAATCAAGGAAATTGATCAAGATAATGATGGACGCATAGATTATAATGAGTTTGTAGCCATGATGCAGAAAGGAAATGTTCCTGGAATTGCCAGGAAAGGCCTCGAAAATAGCTTCAGCATCGGTTTCAGGGAGAGGAATTAA 1734 0.421 MGNTCVGPSISKNGFLQSVSAAMWKSRTLDEESVSNGGTVNEETTREPESSSMPVQSKPPEQMTMPKPETKPEQDQKQKSQEPKPKRPASIKRVSSAGLRVGSVLQTNNGNLKEFYIVGRKLGQGQFGTTFLCVEKATGNEYACKSMAKRKMVTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELIRTIVGVVEACHSLGVMHRDLKPENFLFVNQQEDSLLKTIDFGLSVFFKPGEVFADVVGSPYYVAPEILRKRYGPEADVWSAGVILYILLSGVPPFWAETEQGIFEEVLRGDLDFSSEPWPHISESAKDLVRKMLIRDPRRRLTAHQVLCHPWIQVDGLAPDKPLDSAVLSRLKQFSAMNRFKKMALRVIAENLSEEEIAGLREMFKMIDADNSGQITFDELKAGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITQDELQQACVEFGVEDLRLEEIIKEIDQDNDGRIDYNEFVAMMQKGNVPGIARKGLENSFSIGFRERN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3242 577 ProSitePatterns EF-hand calcium-binding domain. 536 548 IPR018247 -
Bisa01g3242 577 ProSitePatterns EF-hand calcium-binding domain. 502 514 IPR018247 -
Bisa01g3242 577 ProSiteProfiles EF-hand calcium-binding domain profile. 417 452 IPR002048 GO:0005509
Bisa01g3242 577 Gene3D - 399 559 - -
Bisa01g3242 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 107 548 - -
Bisa01g3242 577 SMART serkin_6 116 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3242 577 MobiDBLite consensus disorder prediction 27 59 - -
Bisa01g3242 577 SMART efh_1 421 449 IPR002048 GO:0005509
Bisa01g3242 577 SMART efh_1 493 521 IPR002048 GO:0005509
Bisa01g3242 577 SMART efh_1 457 485 IPR002048 GO:0005509
Bisa01g3242 577 SMART efh_1 527 555 IPR002048 GO:0005509
Bisa01g3242 577 ProSiteProfiles Protein kinase domain profile. 116 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3242 577 SUPERFAMILY Protein kinase-like (PK-like) 115 375 IPR011009 -
Bisa01g3242 577 FunFam Calcium-dependent protein kinase 1 382 556 - -
Bisa01g3242 577 ProSiteProfiles EF-hand calcium-binding domain profile. 453 488 IPR002048 GO:0005509
Bisa01g3242 577 CDD EFh 422 481 IPR002048 GO:0005509
Bisa01g3242 577 ProSiteProfiles EF-hand calcium-binding domain profile. 489 524 IPR002048 GO:0005509
Bisa01g3242 577 ProSitePatterns EF-hand calcium-binding domain. 430 442 IPR018247 -
Bisa01g3242 577 Pfam EF-hand domain pair 492 553 IPR002048 GO:0005509
Bisa01g3242 577 Pfam EF-hand domain pair 422 482 IPR002048 GO:0005509
Bisa01g3242 577 MobiDBLite consensus disorder prediction 27 95 - -
Bisa01g3242 577 MobiDBLite consensus disorder prediction 68 89 - -
Bisa01g3242 577 Gene3D Phosphorylase Kinase; domain 1 117 201 - -
Bisa01g3242 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Bisa01g3242 577 CDD STKc_CAMK 115 373 - -
Bisa01g3242 577 Gene3D Transferase(Phosphotransferase) domain 1 202 398 - -
Bisa01g3242 577 CDD EFh 493 553 IPR002048 GO:0005509
Bisa01g3242 577 FunFam Calcium-dependent protein kinase SK5 202 386 - -
Bisa01g3242 577 FunFam Calcium-dependent protein kinase 1 118 201 - -
Bisa01g3242 577 ProSitePatterns EF-hand calcium-binding domain. 466 478 IPR018247 -
Bisa01g3242 577 ProSiteProfiles EF-hand calcium-binding domain profile. 527 558 IPR002048 GO:0005509
Bisa01g3242 577 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Bisa01g3242 577 Pfam Protein kinase domain 117 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3242 577 SUPERFAMILY EF-hand 413 553 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3242 Bisa-ChrBisa01 74275238 74283809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3242 1 574 EF-hand Containing Proteins AT5G04870 76.634 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa01g3242 Pkinase 7e-74 CL0016