Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3194 ATGGCTTCGCCGACTCTGCGCAGCTCTCGATCAAAGTCTCTCAGGGATGACGACTCCGACTCCGCCAAGCTGGAGGGCACCGGTAGCTGGGACGCCATCGAATGGACCAAGATTGAGCCCGATTTACGCGTCGTCTCGCATGAGAATTTTGATTTCTTGCTTGAGGCAGAGCAAATCAAAGCCCAAGAACATGGTGTTGTTCTTGTTAATAATGATGATGCGGGAACATTATTGGTTACAAATTTTCGTCTTCTATTTGTGAGCGAGAAAACTACAAAAGAAATTGCCCTTGGAACAATACCACTAGCAACAATCGAGAAGTTTAGCAAGATAGCTGTAAAGGCTCAGTTGGTTACTCGTCAATCTGATAAAACACCACCACAGAGACTGCTCCAAGTCATTGGAAAGGATATGAGAATTATAGTTTTTGGTTTTAGGCCTCGTACAAAACAGAGACGTGTTATATATGATGCATTACTGAGGTTAACAAGGCCAGCAAGACTATGGGATCTATATGCTTTTGTATCTGGGCCTTCTAAATTGGAAAACACTAACCCAAAGGTGCGCTTACTTGATGAGTATTTTCGGCTTCTTGGAAAAGGATCTTATCGTGCATCAATCAATATGATTGAAAGTCAGTCCTTTACCTTGTCAAATGATTTGTGGAGAATAAGTAGTGTGAATTCCAACTATGCCATGTGCCAGACTTATCCATTTGCTTTGATTATTCCAAAGAGCATTAGTGATGATGAAGTTCTCCAGGCTTCCAGATTTCGTGCAAGAAGCCGGCTGCCTGTGGTTTCATGGTGTCATCCTGGTACTGGAGCAGTCCTTGCTCGTTCATCCCAACCCTTAGTTGGTCTTATGATGAATGTGAGGAGCAACACAGATGAAAGGCTTGTGGCTGCACTTTGCAGTAAACTTGTTGATGGCTCACGGAGGAAGCTGTATATTGCTGATGCAAGACCAAGGAAAAATGCATTAGCTAATGGAGCCATGGGAGGTGGCTCAGAATCATCATCACGTTACTTTCAATCTGAGATAGTCTTTTTCGGGATAGACAACATCCATGCAATGAGAGACAGCTTTGCTCGGCTCAGAGAATACTTGGATACTTATGGCAGAGCATCATCGGATGGAATGTCATCTTTTTTGAGAAATGGTGGGTGGACATGGGGTGGAGGGTTGCTAAGTAGTATGTCTGCTTCAGTATCAACCCTTGGGGACAGTGGATGGTTACTGCATGTTCAAAATGTCTTGGCTGGTGCAGCTTGGATCGCTGCTCGTGTTAGTATTGAAATGGCTTCTGTGCTTGTGCATTGCAGTGATGGATGGGATAGAACAACTCAGTTGGTTTCACTTGCTAGTTTGTTGCTAGATCCATTCTACCGGACATTTGAAGGGTTTCAGGCACTTGTTGAAAAGGACTGGCTAGCATTTGGTCATCCATTTTCAGATCGTGTGGGAATGCCGTCTGTCTCTGGAAGTGGCAACACACCTTCTGAGTTGTCTTGGCAGTCTTCCACTGGAAGTCTGCCACCATCACCCATGCGCCAGTCATCAGGAACATTCAGTTCTCAACCTCCAATGTCTCATGCACAGAGTTCAAGCAACTACTCTCCAATTTTTGTGCAGTGGGTGGATTGTGTTTCACAATTGCTACGGACATATCCTTTTGCTTTTGAGTTCTCCTCGGCTTTCCTGGTGGACTTCTTGGACTGTGTGCTTTCTTGTCGTTTTGGAAACTTCCTATGTAATAGTGAAAGGGAAAGGCAGCAGTTGAATGTTTTTGAAGCTTGTCAATGTTTGTGGGCTTACTTGGCTGAGCTACGTGCTTCAGAAGACGGTTCTCATGTGCATTATAACCTCTTTTATGAACCATTGAAGCACAATGGTCCGCTTTTGCCTCCTGCGGCAGCTTTAGCCCCAACTTTGTGGCCTCAATTCCATCTTCGTTGGGCTTGCCCTGAAGAATCACAAGGCGGGGAGATTGAAGCAGAATGTAGGAAGATGGCTTCGAAATACTATGAGATGAGGAAGGCTAAAGAAGCTGCAGAAAGGAAAGCCATAGAAATTACAAATGCCTTGGAATCATTGAATGTAGAATTGAGAAATGAGAAGCAGCTAAGAATCTCATCTATGAACGTGGCCAAAAGAAAAACCAAAGAAAATGTGGTCATGAAGCGAGCAATTCAGTCAATTGGGCGCAAGGTTCACTTCTCTGGCAGTGACGATTGTATTGTTGATATTGAAATCTGCCCAGACGAAGCAGCACAAAATACTTCCCTCGGAAAAGAATGTGATGATATAAAGGATTTGTCCGCTTCAGTATCATATATAGAAGATGACAATGATGCAAACAATGCTATCAGTCGAGTATGTGAAAGTCTGTGTCCGTTTCGCGCTGAAGACGGACGTTGCAGGTGGCCAAATGCCACTTGTGCTCAACGGGGTAGCCAGTTTGTTGGTCTAAAGGCAAATTTTGATGCACTTGACCAACTGTCAATTGATGATGATTATTTCAAGCCCGAGTGA 2535 0.4418 MASPTLRSSRSKSLRDDDSDSAKLEGTGSWDAIEWTKIEPDLRVVSHENFDFLLEAEQIKAQEHGVVLVNNDDAGTLLVTNFRLLFVSEKTTKEIALGTIPLATIEKFSKIAVKAQLVTRQSDKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIYDALLRLTRPARLWDLYAFVSGPSKLENTNPKVRLLDEYFRLLGKGSYRASINMIESQSFTLSNDLWRISSVNSNYAMCQTYPFALIIPKSISDDEVLQASRFRARSRLPVVSWCHPGTGAVLARSSQPLVGLMMNVRSNTDERLVAALCSKLVDGSRRKLYIADARPRKNALANGAMGGGSESSSRYFQSEIVFFGIDNIHAMRDSFARLREYLDTYGRASSDGMSSFLRNGGWTWGGGLLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVSIEMASVLVHCSDGWDRTTQLVSLASLLLDPFYRTFEGFQALVEKDWLAFGHPFSDRVGMPSVSGSGNTPSELSWQSSTGSLPPSPMRQSSGTFSSQPPMSHAQSSSNYSPIFVQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSERERQQLNVFEACQCLWAYLAELRASEDGSHVHYNLFYEPLKHNGPLLPPAAALAPTLWPQFHLRWACPEESQGGEIEAECRKMASKYYEMRKAKEAAERKAIEITNALESLNVELRNEKQLRISSMNVAKRKTKENVVMKRAIQSIGRKVHFSGSDDCIVDIEICPDEAAQNTSLGKECDDIKDLSASVSYIEDDNDANNAISRVCESLCPFRAEDGRCRWPNATCAQRGSQFVGLKANFDALDQLSIDDDYFKPE 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3194 844 SUPERFAMILY PH domain-like 53 175 - -
Bisa01g3194 844 ProSitePatterns Tyrosine specific protein phosphatases active site. 439 449 IPR016130 GO:0016311|GO:0016791
Bisa01g3194 844 Gene3D - 59 163 IPR011993 -
Bisa01g3194 844 Pfam Myotubularin-like phosphatase domain 172 592 IPR010569 -
Bisa01g3194 844 MobiDBLite consensus disorder prediction 491 536 - -
Bisa01g3194 844 ProSiteProfiles Myotubularin phosphatase domain. 202 650 IPR010569 -
Bisa01g3194 844 MobiDBLite consensus disorder prediction 10 24 - -
Bisa01g3194 844 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 209 654 IPR029021 -
Bisa01g3194 844 PANTHER MYOTUBULARIN-RELATED 44 751 IPR030564 -
Bisa01g3194 844 CDD PTP-MTM-like 263 552 - -
Bisa01g3194 844 MobiDBLite consensus disorder prediction 1 25 - -
Bisa01g3194 844 SMART gram2001c 44 112 IPR004182 -
Bisa01g3194 844 Coils Coil 682 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3194 Bisa-ChrBisa01 72839028 72862445 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3194 1 844 Protein tyrosine phosphatase (PTP) family AT3G10550 64.547 0.0 1116