Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3184 ATGCTGGCAATGGAGAAGGATTTTGATTCCAAGTTGAGGATTCAGGATAATTCACCTAATGGTGGGAATGTGCAGAGATCTCAGAGCATTCCCTTCCGAGCTCCTCAGGAGAATTGCACCATACAGGACTTTGAATTGGGCAAGATCTATGGCGTTGGTTCTTATTCGAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATCACAAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCTTGGTGCTTGATCAATTGGACCATCTGGGCATTGTGCGGCTGTTTTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCATCTGTCAGAGGATGAAGCACGATTCTATGCAGCCGAAGTTGTGGATGCTCTTGAATACATACATAATTTGGGATTGATACATCGCGATATTAAGCCCGAGAACTTGTTGCTTACAGCTGAAGGACATATTAAAATAGCTGACTTTGGGAGTGTGAAGGTTATGGAGGGTAGCCCAATCACAGTCCTCCTCCCGAATGCAGCATCAGATGATAAAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGTTGCACATTATACCAAATGCTCTCTGGAACTTCTCCTTTTAAAGATGCGAGTGAATGGCTTATTTTCCAAAGAATCATTGCTAGAGATATTCGATTTCCAGATTATTTTTCTGATGAAGCAAGAGACCTTATTGACCGGCTATTGGATTTGGATCCCAGCAGGAGACCAGGTGCAGGCCCTGATGGTTATACTGTTTTGAAAAGGCATCCCTTTTTCAGGGGAGTTGACTGGAGTAACTTAAGGCATCAAACCTCCCCAAAACTTGCTATGGAACCAGATGTGCAGTCACCTGATGGTGATGATGCTCATGATTCATCATGGAATCCTTCTCATATTGGTGATGGTTCAGCTAGGCAACTTGATGGAAATACTGGTGCTACATCATCTTCTGAAGGGATTGGTCACATAACCAGGCTAGCCTCAATTGATTCTTTTGATTCAAAATGGCAACAATTTTTAGATCCTGGGGAATCTGTTATTATGATCTCAACGGTAAAAAAGATGCAGAAACTAACAAGCAAGAAGGTGCAGCTTATTCTTACCAATAAGCCAAAGTTGATCTATGTGGACCCTTCAAAGCTTATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGATCTAAGCATCCAAGTGACAAGTCCTTCACATTTCAAAATTTGCACACCAAAGAAGGTAATTGCATTTGAGGATGCAAAGCAAAGAGCGTATCAGTGGAAGAAAGCAATTGAAGGCCTACAAAACCAGTGA 1473 0.4182 MLAMEKDFDSKLRIQDNSPNGGNVQRSQSIPFRAPQENCTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERLVLDQLDHLGIVRLFFTFQDTFSLYMALESCEGGELFDQITRKGHLSEDEARFYAAEVVDALEYIHNLGLIHRDIKPENLLLTAEGHIKIADFGSVKVMEGSPITVLLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSDEARDLIDRLLDLDPSRRPGAGPDGYTVLKRHPFFRGVDWSNLRHQTSPKLAMEPDVQSPDGDDAHDSSWNPSHIGDGSARQLDGNTGATSSSEGIGHITRLASIDSFDSKWQQFLDPGESVIMISTVKKMQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSHFKICTPKKVIAFEDAKQRAYQWKKAIEGLQNQ 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3184 490 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3184 490 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Bisa01g3184 490 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Bisa01g3184 490 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3184 490 FunFam 3-phosphoinositide-dependent protein kinase 1 360 490 - -
Bisa01g3184 490 Coils Coil 470 490 - -
Bisa01g3184 490 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bisa01g3184 490 Gene3D - 360 490 IPR011993 -
Bisa01g3184 490 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 339 - -
Bisa01g3184 490 SUPERFAMILY PH domain-like 306 489 - -
Bisa01g3184 490 MobiDBLite consensus disorder prediction 14 29 - -
Bisa01g3184 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bisa01g3184 490 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Bisa01g3184 490 Gene3D Transferase(Phosphotransferase) domain 1 128 326 - -
Bisa01g3184 490 SUPERFAMILY Protein kinase-like (PK-like) 27 330 IPR011009 -
Bisa01g3184 490 MobiDBLite consensus disorder prediction 1 29 - -
Bisa01g3184 490 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3184 490 MobiDBLite consensus disorder prediction 326 371 - -
Bisa01g3184 490 Pfam PH domain 387 489 IPR033931 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3184 Bisa-ChrBisa01 72375606 72394829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3184 1 490 AGC Kinase Gene Family AT3G10540 80.933 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Bisa01g3184 Pkinase 1.5e-64 CL0016