Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3158 ATGGGTCGTGATTCTGCAACTTCACTTGCTCCCGGGTTCCGATTTCACCCCACTGACGAAGAACTCGTTCGTTACTACCTCAGGCGCAAGGTTTCTGGCAAATCATTCCGGTTCGACCCAATCGCGGTCATCGACATCTACAAATCCGAACCTTGGGACCTTCCTTGTCAGTCGAAGCTGAAAAGCAGGGACTTGGAGTGGTACTTCTTCAGTGCGCTGGACAAGAAGTACGTGAATGGGTCGAGGACGAATCGGGCCACTGAGAAAGGTTACTGGAAGACTACGGGAAAGGATCGCCTGGTGCGACACGGCTCCCGGACAGTCGGGATGAAGAAGACCCTCGTTTATCATAGTGGGCGGGCGCCGCGTGGCGCCCGTACCAATTGGGTCATGCATGAATACAAAATGGCCGATGAGGAATTGGCGAAAGCAGGAATAGCACAGGATGCGTTTGTGCTCTGCAGGATTTTCCAGAAGAGTGGTACTGGTCCAAAGAATGGGGAGCAGTATGGTGCTCCCTTTGTGGAGGAGGAATGGGAAGATGATGAGGTTCCCGCAGCTCCACTGCCAGGCAATGAGGCTGGCACTGATGAAATGGTCTTCATCGGTGATGATGCTTTTGTTGAAACAAACGACCTTGAACAGTACCTTGATATGGGTGTGGCATCTGAAAGTGCTGGTCTTCCATTGAACTTTTATCAAGGGGAGTGTAGCAGCTATCCTGAGCATTCCCAGGAATTTACTGAAGATAAGAAGCCTGTGGTAGGAATTGCTGAATCTTTTGAGCCTCAACACGACCTGTTCTTGGATAAGCCTGGGCAATATGCTGTGGACAGCGAGCCAGTGAAAGATGGTATTGATGGTGAAGCCAGTGATGATAGGAATCCCCTGAATTATAATTATGCGTTTGATGAACTATACGTGGATGCCACTGATAATCTTCTTGTAGATGATGGATCATTCTTGGAAGCCAATGATCTTGTAAATCCTGTTGAGCCTTATCCTACCAATACCGATGGTGCTGATATTGACATGACAGAAGAGTATCTTATGTACTTTGATGCTGATGATGATATTTCACAGTATATATCTTTTGATTCTCCCGAATTTACTGGGACTGAATACCCTGTTCCTGACCTAGGACCACCTTTAACCCAGCAGAATGTGGATGAAGAAACCAAGGATGTTTCCGTGGCCAGTAAAAATGATTTAGAAGCACATTCTAGGAAAGAAGCTTCCTCTTCAAAGCAGTACCCAGGGCCGTCAAAATTGGTATCAGGAAATGCACATTCATTTATGAAGCAGGCCAGCCACTTGTTAGACAGCATACCTGCTCCCCCTGCATTTGCTTCAGAATTTCCTCCTAAGGATGTTGCTCTTCAGATTCATTCGACCGGTCAATCTTCCAACTCAGCTCATGTAACTGCAGGCATGATTAGAATAACTGTGAGAGCCAACAGGACGGACTGGACGTTGGGCAAGAACCGGGAGCTCGATGTTGTTATCTCATCTTGCTTCTCCCAGCCTGGTGTTAATTCTGCTGATTTAGTGCCTATTTCTGGTTTGCTCTCCGATAAGGCAGCGTTCGTAGTGTCACACGGCTGGATCTTCCTAATGGTTTTTTCAGTTCTATTTCTTTCACTGAGTTTCAAGATTGGATGTTTCATGTATACTGGTAAATGA 1683 0.4688 MGRDSATSLAPGFRFHPTDEELVRYYLRRKVSGKSFRFDPIAVIDIYKSEPWDLPCQSKLKSRDLEWYFFSALDKKYVNGSRTNRATEKGYWKTTGKDRLVRHGSRTVGMKKTLVYHSGRAPRGARTNWVMHEYKMADEELAKAGIAQDAFVLCRIFQKSGTGPKNGEQYGAPFVEEEWEDDEVPAAPLPGNEAGTDEMVFIGDDAFVETNDLEQYLDMGVASESAGLPLNFYQGECSSYPEHSQEFTEDKKPVVGIAESFEPQHDLFLDKPGQYAVDSEPVKDGIDGEASDDRNPLNYNYAFDELYVDATDNLLVDDGSFLEANDLVNPVEPYPTNTDGADIDMTEEYLMYFDADDDISQYISFDSPEFTGTEYPVPDLGPPLTQQNVDEETKDVSVASKNDLEAHSRKEASSSKQYPGPSKLVSGNAHSFMKQASHLLDSIPAPPAFASEFPPKDVALQIHSTGQSSNSAHVTAGMIRITVRANRTDWTLGKNRELDVVISSCFSQPGVNSADLVPISGLLSDKAAFVVSHGWIFLMVFSVLFLSLSFKIGCFMYTGK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3158 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 209 - -
Bisa01g3158 560 MobiDBLite consensus disorder prediction 394 412 - -
Bisa01g3158 560 FunFam Nac domain-containing protein 86 18 162 - -
Bisa01g3158 560 MobiDBLite consensus disorder prediction 413 427 - -
Bisa01g3158 560 Pfam No apical meristem (NAM) protein 11 135 IPR003441 GO:0003677|GO:0006355
Bisa01g3158 560 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Bisa01g3158 560 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Bisa01g3158 560 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Bisa01g3158 560 MobiDBLite consensus disorder prediction 371 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3158 Bisa-ChrBisa01 71265673 71269468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3158 1 552 NAC Transcription Factor Family AT5G04410 44.426 2.06e-144 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa01g3158 NAM 5e-36 No_clan