Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3148 ATGCCTCGGTGCAGACGCGGCTATGTACACGTGGTCAACAATGATTTCACGCAGTGGCAGATGTACGCTATCGGCGGCAGTGCCAACCCCACCGTAAACAGCCAGGGCAACCGTTACACAGCTCCCTCCGATCCTAATGCTAAAGAGGTGACGAAGCGCGTGGACACAGACGAAAGAGATTGGGGAGGTTGGAATTGGAGGACAGAGGGAGACTTAATGGTAAATGGAGCATACTTTGTGGAGTCGGGGGATTGGATGAGCACAGAGTACGCCAGGGCTTCCAGCGTGGCACCACAATCTTCCATTCAGATTGACCGCCTCACTTATAACGCCGGTGTCTTCAATGACCCAAGGGAAAATGGAAATTTATTTCCTGGATTCATGGGTGGCGGTCGAACAGTTACCGCCGCCATTGGCAAAGGAAACGGCGGATCTGGAGACGACAACGGCAAAGACTTCTTCGGAGTGATGTTCAAAGGTGGAAATAGCAAAGCGCCACCACCCTCCTCACCCATTCTTTCAACCTTGTTGTCTCTTTTAATAATTTTCATTTCTTACACAATCACCAGCCATGGTGTACTGTTGCCATTATTGTGA 597 0.5042 MPRCRRGYVHVVNNDFTQWQMYAIGGSANPTVNSQGNRYTAPSDPNAKEVTKRVDTDERDWGGWNWRTEGDLMVNGAYFVESGDWMSTEYARASSVAPQSSIQIDRLTYNAGVFNDPRENGNLFPGFMGGGRTVTAAIGKGNGGSGDDNGKDFFGVMFKGGNSKAPPPSSPILSTLLSLLIIFISYTITSHGVLLPLL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3148 198 PRINTS Pollen allergen Amb family signature 64 88 IPR018082 -
Bisa01g3148 198 PRINTS Pollen allergen Amb family signature 93 116 IPR018082 -
Bisa01g3148 198 PRINTS Pollen allergen Amb family signature 22 41 IPR018082 -
Bisa01g3148 198 PANTHER PECTATE LYASE 18-RELATED 1 115 IPR045032 GO:0030570
Bisa01g3148 198 Gene3D - 1 115 IPR012334 -
Bisa01g3148 198 SUPERFAMILY Pectin lyase-like 1 111 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3148 Bisa-ChrBisa01 71044351 71046620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3148 1 120 Polysaccharide Lyase AT3G54920 70.248 9.20e-58 187