Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3112 ATGGAGAGGCGTTATGGGTACGGGAATGGGGTGGTGATGACCAGAGACCCCAAGCCCAGGTTGAGATGGACGGCTGATCTTCACGATCGCTTTGTCGACGCCGTCACCAAGCTTGGTGGCCCAGACAAAGCGACTCCCAAGTCTGTATTGAGGTTAATGGGCTTGAAAGGTTTGACTTTGTATCATTTGAAGAGTCATTTGCAGAAGTATAGACTTGGACAGCAGGCTCGAAAACAAAACACTGAAGAACAACACAAAGAGAACAATAATAGAGGTTCATGTGTGCATTTCAATAATTGTTCTTCGTGGCCTAACACCAATTACAGATGCAATAACCAAATGGAGGAAATCCCAAAAGCAGAGGCATTGAGGAGTCAAATGAAATTTCAAAGGCAATTGGAAGAGCAGCTTGAGGTACAGAAGAAACTGAAGATGAGAATAGAGGCTCAAGGGAAGTACTTGCAAGCCATGTTGGAGAAAGCTCGGAAGAGCCTTTCTTTGGACATGAATGGATCAAGTAGCCTTGAAGCAGCAAGAGCTCAACTCACAGGTTTCAATTCTGCTTTGTCTAATATCATGGAGAACATGAACAAAGACACCAAAGAAAACATAATAGAAATGAATGCTTTCTACAAGAAGACGCACGATTTGTCGCCTTTTGGAATTTTCCAGGAAGGAGAGGGAGAAGATCATAAGGATCTCAATCCTAAAGTTGAAGTGGATTCTATACAGTTTGACCTAAACATCAAAGGTAGCTATGAGTTTGTATCTCCAAGTGCAGCTGATATGGATTCCAAAATGACCTCATACGGAGTGTAA 819 0.4274 MERRYGYGNGVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNTEEQHKENNNRGSCVHFNNCSSWPNTNYRCNNQMEEIPKAEALRSQMKFQRQLEEQLEVQKKLKMRIEAQGKYLQAMLEKARKSLSLDMNGSSSLEAARAQLTGFNSALSNIMENMNKDTKENIIEMNAFYKKTHDLSPFGIFQEGEGEDHKDLNPKVEVDSIQFDLNIKGSYEFVSPSAADMDSKMTSYGV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3112 272 Gene3D - 17 75 - -
Bisa01g3112 272 Pfam MYB-CC type transfactor, LHEQLE motif 120 163 IPR025756 -
Bisa01g3112 272 SUPERFAMILY Homeodomain-like 18 75 IPR009057 -
Bisa01g3112 272 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Bisa01g3112 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Bisa01g3112 272 Coils Coil 120 150 - -
Bisa01g3112 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 202 IPR044848 GO:0003700
Bisa01g3112 272 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 73 IPR006447 GO:0003677
Bisa01g3112 272 FunFam Myb family transcription factor 17 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3112 Bisa-ChrBisa01 69621222 69623441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3112 11 191 G2-like Transcription Factor Family AT3G24120 54.011 1.57e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa01g3112 Myb_DNA-binding 2.1e-07 CL0123