Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3107 ATGGAAGCATACGCAAGCAAGAACGCACAAGAATATTCAAAAGCTTTTAATCAGGTTAATTTGCCAATTGCCACTTGCTTCAAATCTCTGGCATTAGAATTCATATCGTTTCTGGGAAATCTGGGACTGTTTTGGGATTGGCGTTGCTGGGTTTTAAAAAGGCTAGAAAATCCAGAAATTCTTTTACTATATTGTTTCTGGGTTTTCCTTGCCTTCATTAAATTTCGGATTGATTTAATCATGGGTTATTATTCTCAGCTCTTTTTCCATTTGCTTTTGTCCATTCTCGCGGGAGTCTGTGCTGCTTCCCCCATTGGAGATCAGAAGAGAGATAGAATCGCTGAGCTACCAGGACAACCAAAGAATGTGGATTTTGCTCAGTACTCAGGCTATGTGACAGTGAATGAAGAGTCAGGGAGGGCATTGTTTTACTGGTTTACTGAGGCACCGGCGAGTCGTATTCCAAGGTCAAGGCCACTTGTGCTATGGCTTAATGGTGGTCCTGGATGCTCCTCTATTGCTTATGGGGCGTCTGAAGAAATAGGCCCTTTTCGCATTAGGCCTGATGGGAAGTCCCTTTACTTGAATCCTTTTGCTTGGAACAAGTTGGCAAATATACTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATACGAATAAAACATCAGATCTGTACACAATGGGTGACCGAAGAACAGCTGAAGATGCATATACATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAACATAGAGACTTCCACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCACAGTTGGCTCAGATTGTTTACCAGAAAAACAGGGGAATCAAGAATCCAGTTATAAATTTTAAGGGATTCATGGTCGGAAATGCTGTAACTGACGATTACTATGACTATGTTGGAACATTTGAGTACTGGTGGACCCATGGTTTGATTTCAGATTCCACATATAAGATGCTGCGACTTGCCTGTAAGTCTGGATCCTCCCAGCATCCTACAGTACAATGCATGCAAGCTCTTAGAGTTGCAGTTGTGGAGCAGGGAAACATTGATCCATATAGCATTTATACACAGCCATGCAATAATATGGCATCACTGAGGCACAGCTTGAGGGGTCGCTATCCATGGATGTCTCGTGCATATGATCCCTGTATTGAGAGGTATGCTGACTTGTACTTCAATCATCCTGAAGTTCAGAAGGCACTCCATGCAAATATAACTGGGATTCCATATTCATGGAAGTCATGCAGTGATATTGTTGGGAACTATTGGGCGGATTCTCCATTATCTATGCTTCCTATATACCAAGAACTCATTACTGCTGGTATCAGGATATGGGTATACAGTGGAGACACAGATGCCGTAGTTCCAGTAACTGCAACTCGATATTCTATTGATGCCTTGAAGCTACCTACCATCACCAACTGGTACCCTTGGAATGATAATGGCAAGGTTGGCGGATGGAGTCAAGTTTATAAAGGCCTCACATTGGTTACAGTTACAGGAGCAGGACATGAGGTTCCACTTCACAGGCCTCGACAAGCATTTATCCTTTTCAGGTCATTCTTGGAGAACAAATCCATGCCAAGTTGA 1614 0.4232 MEAYASKNAQEYSKAFNQVNLPIATCFKSLALEFISFLGNLGLFWDWRCWVLKRLENPEILLLYCFWVFLAFIKFRIDLIMGYYSQLFFHLLLSILAGVCAASPIGDQKRDRIAELPGQPKNVDFAQYSGYVTVNEESGRALFYWFTEAPASRIPRSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNPFAWNKLANILFLDSPAGVGFSYTNKTSDLYTMGDRRTAEDAYTFLVNWFERFPQYKHRDFHIAGESYAGHYVPQLAQIVYQKNRGIKNPVINFKGFMVGNAVTDDYYDYVGTFEYWWTHGLISDSTYKMLRLACKSGSSQHPTVQCMQALRVAVVEQGNIDPYSIYTQPCNNMASLRHSLRGRYPWMSRAYDPCIERYADLYFNHPEVQKALHANITGIPYSWKSCSDIVGNYWADSPLSMLPIYQELITAGIRIWVYSGDTDAVVPVTATRYSIDALKLPTITNWYPWNDNGKVGGWSQVYKGLTLVTVTGAGHEVPLHRPRQAFILFRSFLENKSMPS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3107 537 Gene3D alpha/beta hydrolase 107 369 IPR029058 -
Bisa01g3107 537 Pfam Serine carboxypeptidase 117 532 IPR001563 GO:0004185|GO:0006508
Bisa01g3107 537 FunFam Carboxypeptidase 107 369 - -
Bisa01g3107 537 ProSitePatterns Serine carboxypeptidases, histidine active site. 502 519 IPR033124 GO:0004185
Bisa01g3107 537 Gene3D - 391 427 - -
Bisa01g3107 537 ProSitePatterns Serine carboxypeptidases, serine active site. 259 266 IPR018202 GO:0004185
Bisa01g3107 537 Gene3D - 438 531 - -
Bisa01g3107 537 PRINTS Carboxypeptidase C serine protease (S10) family signature 245 270 IPR001563 GO:0004185|GO:0006508
Bisa01g3107 537 PRINTS Carboxypeptidase C serine protease (S10) family signature 196 208 IPR001563 GO:0004185|GO:0006508
Bisa01g3107 537 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 219 IPR001563 GO:0004185|GO:0006508
Bisa01g3107 537 PRINTS Carboxypeptidase C serine protease (S10) family signature 502 515 IPR001563 GO:0004185|GO:0006508
Bisa01g3107 537 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 113 519 IPR001563 GO:0004185|GO:0006508
Bisa01g3107 537 SUPERFAMILY alpha/beta-Hydrolases 108 535 IPR029058 -
Bisa01g3107 537 FunFam Carboxypeptidase 438 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3107 Bisa-ChrBisa01 69307842 69321730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3107 396 535 Calmodulin-binding Proteins AT2G22960 29.078 9.43e-14 68.2