Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3089 ATGTTTTCGGTGATGGATTCAGCGGGGAGGAGATCAGAAAGGTGCTTAGATTCTCAATTATGGCACGCCTGTGCTGGTGCTATGGTTCAAATTCCTCCATTAAACGCGAGAATCTTCTACTTTCCTCAGGGCCACGTAGAGCACGCTCTTGGGAAAGCCGATTTTGGACGAGCCCTAATTCCCACGTTCATTCCCTGCAAAATCTCTGCGATAAAATACATGGCAGATCCTGATACAGACGAAGTGTTTGTGAAAATGGGGTTGATCCCTCTGAGAGAGATGGAATTGGGTTTTGAAGATCATTGGGAAAACAATAATGTTCTTGAGGGACAAGAAAAGAACTCCTCGTTCGCCAAGACATTGACACAATCTGACGCCAATAATGGTGGAGGCTTCTCTGTGCCTCGTTATTGTGCAGAAACCATCTTTCCAAGGTTGGATTACTCTGCTGAACCGCCGGTTCAGACCATCATTGCCAAGGATGTGCATGGACAGAGCTGGAAGTTTAGGCATATCTATAGAGGGACGCCTCGCCGGCATCTTTTAACGACAGGATGGAGCAATTTTGTGAGCCAAAAGAAGCTTGTTGCAGGGGATTCTATTGTGTTTCTTAGGGCAGAGAACGGGGATCTTTGTGTTGGAATAAGAAGGGCTAAGAAGGGGATTGAAGGTGGCACTGTGTTCTCATCTAATTGGAACCAAGCAGCGCTTTCATTCAGGAGGCAATCTTCAGGGTTTTTGTGTGAGGACGAGAGCAGTTTGATGAGGAGGAGGAGACAAGGTGATGAGGATTTAAAGGGGAAAGTGCCACCTGAATCTGTTGCTGAGGCTGTGACTTCTGCTATGAACAACAAGCCCTTTGAGGTTGTCTACTACCCTCGTGCCAGCACACCCGAGTTTTGTGTCCGGGCCTCCGCTGTGAAGACTGCAATGCAAATTAAATGGTGTTCTGGGATGAGATTCAAAATGCCTTTTGAGACTGAAGATTCATCTAGGATAAGCTGGTTCATCGGAACAATATCTTCTGTTCAGGTCACAGATCCAATTCACTGGCCCAATTCTCCCTGGCGACTTTTGCAGGTGGCATGGGATGAACCAGATTTACTTCAAAATGTTACGTGTGTAAACCCTTGGTTGGTTGAACTAGTCTCCAATGTTCCAACCTTCCATCTATCGCCATTCTTGCCACCGAGAAAAAAATTGCGGTTTCTACAGCATCCAGATTTTCCCCTTATCAACCAACTTCCGATGCCATCATTCTCCGGCAATTTTGATAATCACACTAGCGCCTTGTCTAATACTCAGGCCAACAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTATCTCAATCTGATTTCCCTTTCAACAAGGTGCAATGTGACATGCTTCGGGGTGGATTTCTGCGGCTTGACCATGCAGTGCAGCCTGTTGGAACTCCTTGTAGCACTGTCATGGAGAACGATGTCAATATTTCTAGCTTGTTGACTGCTGGATATCCTGGCCGGAGTTTGAAGCAACCCAATGAAGCAAAAGCCCCACACATTTTGTTGTTTGGCCAACTCATACATACCAAGCAGCAGACTTCGACCAGTTGCTCGGCTAACACAAATGGGAACAGTTTTTCGGAAGGGAATTCAGTGAAAACATCAAATGCTTCTGATGGCTAG 1680 0.4643 MFSVMDSAGRRSERCLDSQLWHACAGAMVQIPPLNARIFYFPQGHVEHALGKADFGRALIPTFIPCKISAIKYMADPDTDEVFVKMGLIPLREMELGFEDHWENNNVLEGQEKNSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDVHGQSWKFRHIYRGTPRRHLLTTGWSNFVSQKKLVAGDSIVFLRAENGDLCVGIRRAKKGIEGGTVFSSNWNQAALSFRRQSSGFLCEDESSLMRRRRQGDEDLKGKVPPESVAEAVTSAMNNKPFEVVYYPRASTPEFCVRASAVKTAMQIKWCSGMRFKMPFETEDSSRISWFIGTISSVQVTDPIHWPNSPWRLLQVAWDEPDLLQNVTCVNPWLVELVSNVPTFHLSPFLPPRKKLRFLQHPDFPLINQLPMPSFSGNFDNHTSALSNTQANSSAGIQGARHAQFGLSQSDFPFNKVQCDMLRGGFLRLDHAVQPVGTPCSTVMENDVNISSLLTAGYPGRSLKQPNEAKAPHILLFGQLIHTKQQTSTSCSANTNGNSFSEGNSVKTSNASDG 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3089 559 Gene3D - 115 219 IPR015300 -
Bisa01g3089 559 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 543 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa01g3089 559 SUPERFAMILY DNA-binding pseudobarrel domain 109 218 IPR015300 -
Bisa01g3089 559 FunFam Auxin response factor 315 388 - -
Bisa01g3089 559 FunFam Auxin response factor 115 219 - -
Bisa01g3089 559 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Bisa01g3089 559 SMART B3_2 117 219 IPR003340 GO:0003677
Bisa01g3089 559 Gene3D - 314 388 - -
Bisa01g3089 559 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa01g3089 559 CDD B3_DNA 116 217 IPR003340 GO:0003677
Bisa01g3089 559 Pfam B3 DNA binding domain 117 218 IPR003340 GO:0003677
Bisa01g3089 559 MobiDBLite consensus disorder prediction 533 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3089 Bisa-ChrBisa01 68729059 68731027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3089 1 540 B3 DNA Binding Superfamily AT4G30080 57.428 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa01g3089 B3 1.7e-22 CL0405