Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3088 ATGAATAGCACCAACGATGACAATTCCAGACAAGATCTGGACCCTCAAAGTGACCACAGTTCCGTCTATTTGGCTCATCCCCATCCTCACCCTAACTCTCAGTCTTTTCCTCTCCAAACCCAGCCTCAGCCCCAGCCTCGTCGCCCTCGCGGCTTCGCTGCCACGGCGTCCGCGTCGGCCCCCAATGCTGCCGGAAAGGGAAAGAAAGAGAGAGAAAAAGAGAAGGAGCGCACCAAGCTCCGAGAGCGCCACCGCCGAGCAATCACCAGCCGTATGCTCGCCGGCCTCCGTCAGTATGGTAATTTCCCTCTCCCGGCGCGTGCGGACATGAATGATGTGCTCGCTGCACTCGCACGCGAGGCTGGTTGGGTTGTGGAGGCAGATGGCACCACTTACCGGCAGTGTCCACCTCCATCTCAAATGGCATCATTTGCTGCTAGGTCAGTTGAAAGCCCACTCTCTGCAGGTTCTTTAAGAGCTTGCTCTGTTAAAGAAACACTAGAGAATCAGCCACCAGTACTTAGAATTGATGAAAGCTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCTGAAAGGGACCCAAAGAATGAGAAATATGCAAGTACAAGCCCCATCCATCCAGTTGACTGTTTGGATGCTGATCAGCTTATGCAAGACATTCATTCTGGGGTGCATGAGAATGATTTTACGAGCTCACCTTATGTTCCTGTTTATGTAAAACTTCCAGCAGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGAATTAGGCAGGAGCTAATACATATGAAGTCGTTAAATATTGATGGTGTTATTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCCCAGAAATATGTGTGGTCTGGCTATAGGGAACTTTTTAATGTTATTAGAGAAATCAAATTGAAGTTGCAGGTTGTTATGGCTTTTCATGAATGTGAAGGGAATGATTCTAGTGACCCATTGATTGCCCTCCCACAATGGGTTTTGGAGATTGGAAAAGACAACCAGGATATATTTTTCACAGATCGTGAAGGACGGAGAAATACTGAGTGTCTTTCTTGGGGCATTGACAAAGAGCGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATTTCATGAGAAGCTTTCGGACAGAGTTTGATGATTTGTTTGTACAAGGCCTCATTTCTGCTGTAGAAATTGGACTTGGAGCATCTGGAGAGCTGAAATATCCTTCATTTTCAGCAAGGATGGGTTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATATCTGCTACAAAGTCTGCGCAGAGCTGCGAAATTACGTGGTCACTCTTTTTGGGCTAGAGGACCTGATAATGCTGGTCAATACAATTCTATGCCCCATGAGACGGGATTCTTTTGTGAACGAGGAGATTACGACAACTATTATGGGCGCTTCTTCTTGCATTGGTATGCCCAGTCATTAATAGACCACGCGGATAATGTTTTGTCCCTTGCAAGCCTCGCTTTTGAGGAGACCAAAACAATTGTCAAAGTTCCTGCAGTATACTGGTGGTACAAGACTGCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCTACAAACCAGGATGGTTATTCTCCTGTTTTTGAGGTTCTAAGAAAACATGGCGTGACCATGAAGTTTGTCTGCTTAGGATTTCCTCTTTCTAGTCAGGAAGCTGATGTATCATTGGCTGACCCTGAGGGTTTGAGTTGGCAGGTATTGAACTCAGCGTGGGATCGAGGGTTGATAGTGGCTGGAGAGAATGCAGTGCCATGTTTCGATAGAGAAGGGTTCAAGAGACTAATTGAGATAGCAAAACCAAGAAATGATCCTGATCGCCGCCACTTCTCATTCTTTGCATATCAGCAGCCATCTCTAATTCAAGGGAATATTTGCTTGTCAGAGTTGGATTCCTTCATCAAATGTATGCATGGTAAGGATTATGAGAATGCACTATGA 2010 0.4572 MNSTNDDNSRQDLDPQSDHSSVYLAHPHPHPNSQSFPLQTQPQPQPRRPRGFAATASASAPNAAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSQMASFAARSVESPLSAGSLRACSVKETLENQPPVLRIDESLSPASIDSVVIAERDPKNEKYASTSPIHPVDCLDADQLMQDIHSGVHENDFTSSPYVPVYVKLPAGIINKFCQLIDPEGIRQELIHMKSLNIDGVIVDCWWGIVEGWSPQKYVWSGYRELFNVIREIKLKLQVVMAFHECEGNDSSDPLIALPQWVLEIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFDDLFVQGLISAVEIGLGASGELKYPSFSARMGWRYPGIGEFQCYDKYLLQSLRRAAKLRGHSFWARGPDNAGQYNSMPHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETKTIVKVPAVYWWYKTASHAAELTAGYHNPTNQDGYSPVFEVLRKHGVTMKFVCLGFPLSSQEADVSLADPEGLSWQVLNSAWDRGLIVAGENAVPCFDREGFKRLIEIAKPRNDPDRRHFSFFAYQQPSLIQGNICLSELDSFIKCMHGKDYENAL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3088 669 Pfam Glycosyl hydrolase family 14 254 638 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 513 529 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 548 571 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 406 428 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 270 284 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 530 541 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 291 309 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 313 334 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 479 498 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 586 608 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 Pfam BES1/BZR1 plant transcription factor, N-terminal 65 210 IPR008540 -
Bisa01g3088 669 SUPERFAMILY (Trans)glycosidases 231 662 IPR017853 -
Bisa01g3088 669 MobiDBLite consensus disorder prediction 1 82 - -
Bisa01g3088 669 MobiDBLite consensus disorder prediction 1 18 - -
Bisa01g3088 669 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 173 663 IPR001554 GO:0000272|GO:0016161
Bisa01g3088 669 Gene3D Glycosidases 226 668 - -
Bisa01g3088 669 MobiDBLite consensus disorder prediction 65 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3088 Bisa-ChrBisa01 68637710 68660339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3088 29 662 Glycoside Hydrolase AT5G45300 67.523 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Bisa01g3088 Glyco_hydro_14 1.2e-83 CL0058