Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3076 ATGGACGATATAGACGGTAGCTTCTTCGACCACATCGACGACCTCCTTGATTTCCCCGCCGATGACGTTGTCGCCGGAGCTTCCACCTTGCCGGCCGCCTCCGTGAGCTGCCACTCGTTCCCGAGCATTTGGCCTGCCGAGGCTGACTCGGCGGAGCTCTCCCTTCCGTGTGAAGACAGTATCCAGTTTGAATGGCAACCAAACTTTGTGGAGGACTTCTCCTGTGGGAGCCTCACCCTGAAGAAGGTCGAGCCACCCTGCACCACCGTGGAGTCGGCGCAGAACCAATTTCAGACGTCTAGCCCGGTCTCCGTCCTTGAAAGTAGCAGCTCCTGCGAGAAAACCGCACCTCGCAGCCCGGAAATCTATATTCCCGTACCTTGTGGACGACCACGCAGCAAGCGTCCCCGCCCTGTAAACTTCAACCCTCGTCCTGTAATGCAACTAATCTCCCCTGCTTCTTCCTCTGTTGGCGAGAACACCACGATCAATGCTGCGTCCAAGGCCGCTTCGGATTCAGAGAATTTCGCTGAGTCCCGTCCTGTAATAAAGACACCAAAGCAAGCTTCTGCAGAACACAAGAAGAAGAAAAAGAGAATCAGACTATCAATTCCATTAGGTTCAGCTGATCTGAACCAGAATGCGCCATCTCAAGCAATTAGGAAATGCATGCATTGTGAGATAACTAAGACACCACAATGGAGGGCAGGGCCATTGGGGCCGAAAACCCTCTGCAATGCGTGTGGTGTTCGCTACAAGTCCGGCCGGCTCTTCCCCGAATACCGCCCTGCTGCAAGTCCAACTTTTTGCCCTTCCTTGCACTCCAATTCCCATCAGAAGGTGCTCCAAATGCGAAGCAAGGCAGGCGAAATTACTGCCTCATCAGAACTCATTCCAAACACCATTAGCAGCATTACACTGGAATACATGCCTGGAATTAACGGTGGTATAGGAGAAATAGATGATGATGATGATGATGATGATGATGATATTTTATCTACCAGAGAAGGATTGTTAGAAAAAGTCAAGGTGCTTGATAGAGACATTAAACCATTAACACTGCCCTTCCCTTGCACCCTTTCTATATCTGCTGTGTCCTGTGATGGCCAACATGTACCCACTATTGCTTAA 1131 0.5084 MDDIDGSFFDHIDDLLDFPADDVVAGASTLPAASVSCHSFPSIWPAEADSAELSLPCEDSIQFEWQPNFVEDFSCGSLTLKKVEPPCTTVESAQNQFQTSSPVSVLESSSSCEKTAPRSPEIYIPVPCGRPRSKRPRPVNFNPRPVMQLISPASSSVGENTTINAASKAASDSENFAESRPVIKTPKQASAEHKKKKKRIRLSIPLGSADLNQNAPSQAIRKCMHCEITKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPSLHSNSHQKVLQMRSKAGEITASSELIPNTISSITLEYMPGINGGIGEIDDDDDDDDDDILSTREGLLEKVKVLDRDIKPLTLPFPCTLSISAVSCDGQHVPTIA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3076 376 ProSitePatterns GATA-type zinc finger domain. 223 248 IPR000679 GO:0006355|GO:0043565
Bisa01g3076 376 CDD ZnF_GATA 222 269 IPR000679 GO:0006355|GO:0043565
Bisa01g3076 376 ProSiteProfiles GATA-type zinc finger domain profile. 217 253 IPR000679 GO:0006355|GO:0043565
Bisa01g3076 376 FunFam GATA transcription factor 213 298 - -
Bisa01g3076 376 Pfam GATA zinc finger 223 256 IPR000679 GO:0006355|GO:0043565
Bisa01g3076 376 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 221 280 - -
Bisa01g3076 376 Gene3D - 217 267 IPR013088 GO:0006355|GO:0008270
Bisa01g3076 376 SMART GATA_3 217 267 IPR000679 GO:0006355|GO:0043565
Bisa01g3076 376 PANTHER GATA TRANSCRIPTION FACTOR 11 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3076 Bisa-ChrBisa01 67868999 67872613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3076 97 297 C2C2-Gata Transcription Factor Family AT1G08010 42.786 8.39e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa01g3076 GATA 3.7e-15 CL0167