Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3068 ATGGGTTACGAGAACGATCCGTTTCGGGACGAGGATGGAGAGCCATTGATGGACTATGATGATGTACAATCCGATCGCGAGCTATCTCCCGAACCCCATCAGCAAGGACTGCTCGACGATTTGGAGGAAGACGTCGAAGATTGGCATGGACGAGATCGATCGCAAACTCCTGTCTACGATAACGAATCGTCCATGTTAAAGTCGAAGCCAAGGAAGAGGCTAATCAAGAAAAGTGACACTGGAAGGCAGTCTCTGGCCCCAGAACTTGTTGATGATGATGATGAGGAGGAGGAGGAGGAGGGTAATATTCCGGCGAGTTTTGTGAGAGACGGGTCTGAGGATGGGGAAGGAAGAAAGAGGAAAGGGAAGGATGGTGGCAGTGGGAAGAAGGATAAGAGGCATAAAGGGGAGAAGAAGTTTGGGAGTAGTGGTAAGGGCGGCTCTAAATTTGGTTTATCGAAGAAAGGGTTTGCGGGTAAGGCAGGGAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCTGGTGGGGACTCGGAGGACGATCAGGAGGGTGTCAGGACAGTCGATGATGATAACTTCATAGATGACACTGGAGTGGAACCTGCTTTATATGGTAGTGACAACGAACCCCGTTCTCCTGGTGAATATGCGCAGGCCGAGGAAGGTGAGGAGGATGATGAGATTAAGGAGCTTTTTAAGATGGGTAAGAAAAAGAAGAAGAATGAGAGAAGTCCTGCAGAGATAGCCTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAGGATGCTGAACTTAATAGACAGGGGAAGCCGGCCATCAATAAACTCAAGAAGTTGCCTCTTTTAACTGAAGTCCTCTCAAAGAAGCAACTTCAACAAGAGTTTTTAGATCATGGAGTGCTAACTTTATTGAAGAATTGGCTTGAACCTCTACCAGATGGAAGCTTACCAAATATAAACATCCGCACAGCAATTTTGAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTACGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTCTTATCAAAATCTGATGAAGAAATCAGTGTAAATAGGAAACTAGCTAAGGAACTGGTCGATAAATGGAGTCGACCTATATTTAATAAGAGTACGAGGTTTGAAGACATGAGAAACGTTGATGATGACCGGGTTGCTTTTAGAAGGCCATCAGTTAAAAAGCCTGCAAATAAAGCTTCAGGAATGGAATCCAGAGATGGTGATCTTGATTTGGAATTTTCACAACGCAAGTCTGGACAGTCCTCTTCCAGGCAGCTCACTACTAGGCCTGAAGCAACGCCATTGGATTTTGTGGTGCGACCCCCATCTAAAGTTGACCCAGAAGAAGTTAGAGCCCGTGCAAAACAAGCTGCACAAGATCAGCACCGTATAAAGATGAATAAGAAGCTACAGCAATTGAGAGCACCAAAAAAGAGGCAGCTTCAAGCCACAAAGTTGAGCGTGGAAGGTCGGGGTATGCTCAAGTATTTGTAA 1560 0.4519 MGYENDPFRDEDGEPLMDYDDVQSDRELSPEPHQQGLLDDLEEDVEDWHGRDRSQTPVYDNESSMLKSKPRKRLIKKSDTGRQSLAPELVDDDDEEEEEEGNIPASFVRDGSEDGEGRKRKGKDGGSGKKDKRHKGEKKFGSSGKGGSKFGLSKKGFAGKAGKDHDGDVKEMWDTIAGGDSEDDQEGVRTVDDDNFIDDTGVEPALYGSDNEPRSPGEYAQAEEGEEDDEIKELFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKELVDKWSRPIFNKSTRFEDMRNVDDDRVAFRRPSVKKPANKASGMESRDGDLDLEFSQRKSGQSSSRQLTTRPEATPLDFVVRPPSKVDPEEVRARAKQAAQDQHRIKMNKKLQQLRAPKKRQLQATKLSVEGRGMLKYL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3068 519 PANTHER PROTEIN IWS1 HOMOLOG 1 1 519 IPR044204 GO:0009742|GO:0032784
Bisa01g3068 519 MobiDBLite consensus disorder prediction 1 229 - -
Bisa01g3068 519 MobiDBLite consensus disorder prediction 19 56 - -
Bisa01g3068 519 Coils Coil 255 275 - -
Bisa01g3068 519 MobiDBLite consensus disorder prediction 436 452 - -
Bisa01g3068 519 MobiDBLite consensus disorder prediction 464 485 - -
Bisa01g3068 519 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 248 395 IPR035441 -
Bisa01g3068 519 Pfam TFIIS helical bundle-like domain 335 389 IPR017923 -
Bisa01g3068 519 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 302 392 IPR035441 -
Bisa01g3068 519 MobiDBLite consensus disorder prediction 408 485 - -
Bisa01g3068 519 MobiDBLite consensus disorder prediction 421 435 - -
Bisa01g3068 519 MobiDBLite consensus disorder prediction 158 196 - -
Bisa01g3068 519 ProSiteProfiles TFIIS N-terminal domain profile. 309 392 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3068 Bisa-ChrBisa01 67374375 67378507 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa01g3068 Med26 2.3e-13 No_clan