Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3064 ATGGGCAGCGTGAATCTTCTCGTCTTTTTATTCTCTCTGTTGCCTGGATGTTATACGGCAGCGGCCAAGGTGGTGCTGATTGGGAGCAATGCTACCCTCTCCTTCGATGATATTGAAGCTAATTTTGCCCCCAAACTCAAAGGCTCTGGCGAATCTGGGATCTTATATTTGGCAGAGCCACTTGATGCTTGTACAGCGCTGACAACTAAAGCTGAACAACTTTCAAATGTGAGTGCCCCTTTTGTTTTGATAGTTAGAGGAGGATGTAGCTTTGAGGAAAAGGTCACAAGAGCACAGAAGGCTGGCTTCAAATCTGCAATTGTCTATGACAATGAAGATGATGGTGTCTTAGTTGCAATGGCAGGAAATTCAGCGGCTATATATATACATGCTGTATTTGTAACCAAAGCTTCAGTACTGGCTACTTGTTTCTTTGCCCGCAGGCGTCATGTAAGAAGTGAAAGGCCCCGAGTATCTAGAATCCGTGAATTTCATGGAATGAGTAGATGTCTTGTGAAAGCAATGCCAAGTTTAATATTCACTGCTGTTTTGGAGGATAATTGTACATCAAGGACATGTGCAATATGTCTTGAAGACTATAAAATAGGAGAGAAGCTCAGGATTCTGCCCTGTCATCACAAGTTTCATGCTACCTGTGTGGATACTTGGCTTACTTCATGGAGAACCTTTTGTCCAGTTTGTAAGCGTGATGCAAAAACTGGTTTACCTGATCCACCACCCTCAGAATCCACACCTTTGCTCTCTGTGGCATCCTCTATATTATCATCTTTGAGATCATCATTAGCATCATCTTCAGCTATGCAAATTGTCCGGGCAACACCAGAGTCTCTAGCTGCCTCTCATAGCCACTTTCTCACTAATACCCCTCGTTTTGAGCCATCTCTTTTGTCCTATCACCAATCCCCTTCCCTAATTGTCAGCCGAAGTGCAGTAGATCTTCAGAATGCATCCCAAAGATCTCTAGGTTCTTATTTGAATTCTCCATATTTGTGGAATTGCCCATCTTTGTCATCTCTAAACTCAACTACACATTTTCCAAGTCCAACTAATGCTTCTGGTAGTTCTTATCACCAGCAGCACCCACTTTATCATAGGGAGGGTTCTACAACCTTTTCGCGGTTTGCTTCTGCCCAGTCGCTTCTGGAATACGAAACTGTCTAA 1182 0.4332 MGSVNLLVFLFSLLPGCYTAAAKVVLIGSNATLSFDDIEANFAPKLKGSGESGILYLAEPLDACTALTTKAEQLSNVSAPFVLIVRGGCSFEEKVTRAQKAGFKSAIVYDNEDDGVLVAMAGNSAAIYIHAVFVTKASVLATCFFARRRHVRSERPRVSRIREFHGMSRCLVKAMPSLIFTAVLEDNCTSRTCAICLEDYKIGEKLRILPCHHKFHATCVDTWLTSWRTFCPVCKRDAKTGLPDPPPSESTPLLSVASSILSSLRSSLASSSAMQIVRATPESLAASHSHFLTNTPRFEPSLLSYHQSPSLIVSRSAVDLQNASQRSLGSYLNSPYLWNCPSLSSLNSTTHFPSPTNASGSSYHQQHPLYHREGSTTFSRFASAQSLLEYETV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3064 393 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 134 250 - -
Bisa01g3064 393 SUPERFAMILY RING/U-box 176 247 - -
Bisa01g3064 393 ProSiteProfiles Zinc finger RING-type profile. 193 235 IPR001841 -
Bisa01g3064 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 240 IPR013083 -
Bisa01g3064 393 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 22 149 - -
Bisa01g3064 393 CDD PA_C_RZF_like 8 138 IPR044744 -
Bisa01g3064 393 SMART ring_2 193 234 IPR001841 -
Bisa01g3064 393 Gene3D - 17 142 - -
Bisa01g3064 393 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 153 240 - -
Bisa01g3064 393 Pfam PA domain 62 140 IPR003137 -
Bisa01g3064 393 SUPERFAMILY PA domain 78 123 IPR046450 -
Bisa01g3064 393 Pfam Ring finger domain 192 235 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3064 Bisa-ChrBisa01 67144809 67176900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3064 21 387 C3H Transcription Factor Family AT1G22670 40.920 1.85e-85 264