Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3055 ATGTATGGAGGCGGAGATGACGAGGCCTTGGCCCGCTTGGGCATGATGACGCCGACCCTCCTCAATCCGACCACTTCGTCGGTGATCTCCTGTGAGATATCGCCGTCGACGGCCGCTGCGTCGGTGAGAGACGAGAGGGGACCAGCTCAGCCGCAGTGGAGCCATCAGGAGACGAGAGACTTCATAGCGATCCGCGCGGAGCTGGAACGGGACTTCACGGCGTCCAAGCGGAATAAAACACTCTGGGAGGTTGTCAGCGCAAAGATGATGGAGAGAGGCTTCAGGAGGAGTCCGGAACAGTGTAAATGCAAGTGGAAAAATCTTGTTAATCGCTATAAGGGGAAAGAGACATCTGATCCCGAGCATGGGAGGCAATGCCCATTTTTTGAAGAATTACATGCAATCTTTGATCAGAGAGCACAGAACATGCAGCGGTTACTTCTTGAATCTGAGACCCGTTCAACTCAGACAAAGAAGGGGAATAGAAGACTCAGTGGAGATCGGTCCTCAGAGGAATTCTCAGAAGATGATGATGAGGCTGAAGATGACAGTGAGGAGGAGAGACCTGTTAGAAGCAACTCTCGCAAAAGGAAAGCTGAGAAAATTGTAATGGAGAAGTCTTCAAGGGCACGTATTGCCTCCAATGCTAACAGTAACATTCAGGAAATGCTCAAGGACTTTTTGCAGCAGCAACTAAGGATGGAGATGCAATGGAGGGAGATGATGGAAAGGCGTGCCCATGAAAGGCAACTGTTTGAGCAGGAATGGCGACAGTCAATGGAGAAGCTTGAGAGGGAAAGATTAATGATTGACCAGGCATGGAGGGAGAGGGAAGAGCAGAGGAGAATGAAAGAAGAGAGCCGAGCAGAAAGGAGGGATGCCTTGTTGACAACCCTCTTGAACAAGCTTATCCATGAATTGAATTAG 927 0.5005 MYGGGDDEALARLGMMTPTLLNPTTSSVISCEISPSTAAASVRDERGPAQPQWSHQETRDFIAIRAELERDFTASKRNKTLWEVVSAKMMERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFDQRAQNMQRLLLESETRSTQTKKGNRRLSGDRSSEEFSEDDDEAEDDSEEERPVRSNSRKRKAEKIVMEKSSRARIASNANSNIQEMLKDFLQQQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIDQAWREREEQRRMKEESRAERRDALLTTLLNKLIHELN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3055 308 MobiDBLite consensus disorder prediction 149 203 - -
Bisa01g3055 308 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
Bisa01g3055 308 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Bisa01g3055 308 PANTHER FI21293P1 45 304 - -
Bisa01g3055 308 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Bisa01g3055 308 MobiDBLite consensus disorder prediction 186 203 - -
Bisa01g3055 308 CDD GT1 51 116 - -
Bisa01g3055 308 Gene3D - 53 114 - -
Bisa01g3055 308 MobiDBLite consensus disorder prediction 171 185 - -
Bisa01g3055 308 MobiDBLite consensus disorder prediction 155 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3055 Bisa-ChrBisa01 66838666 66840267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3055 34 303 Trihelix Transcription Factor Family AT2G38250 42.066 1.31e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa01g3055 Myb_DNA-bind_4 1.1e-22 CL0123