Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3046 ATGGCGACCCCAATTGTGTATTGCAGGTGCTATGGGGCAACTGGGAGGGGTTTGGGTTTTAGGAAGAAAGGTGAAATCGCATTTAAGGGTTCACTCTCTAAGCTTAGAAGCCTAAGCAGAGGAACAGATTGGGAAATTCAGAGGGCAAACTGTAACAGTTCGCCGGCGGGGGCGAGGGCGAGGGCGAGGGCGAGGGCGAGGGCAAGGAATTTGCCACCGACGCTTTTTTGTTTTGTTTTGGGGGTGGGGGTGTATTTACACAACATGGGGTACGATTCGGATAGCCCCTCACAAGATGGGAGGGAAGAAGATGATGATGAAGAATATGAGGAGGCTGGCAAGGGCAATCGGTTGCTGGGGTTCATATTTGGAAATGTTGATAATTCGGGTGATCTTGATGTTGATTACCTTGATGAGGATGCAAAGGAGCATCTTTCTGCACTTGCTGACAAGCTGGGTCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCAAAAACACCACCTGGCATTGTTGAACAAGACTATGGTGAGAAAGCTGAAGATGCTGTGGATTATGAAGATATTGACGAAGAGTATGATGGTCCAGAGACTGAAACTGCAAATGAGGTGGACTATTTATTGCCGAAAAAAGAATTTTTCTCCGTTGGAGCCTCTTTGGAAGCTTTGAAGTCAAGATCTTCTGTCTTTGATGATGAAGATTATGATGAGGATTCTGAAAAGGAGCAAGACTTAGTGAATAGCAATTCTGAAGTTGATAATGTCTCTTTAACTGGGGAGCAAGTGGAGAGTGTTGTTGATACATCTAAAGGAAAAGGAGCTCAAGAACTTGATTCACATGACGTCTCACAGCAGTCTGAAGAATTGGACACTGACGTACAAAAACCACAGGAGGATGGGCCTGGAGTTTTGAAAGGTTCTACTCCCTTGCCTATTTTATGTGTGGAAGATGGGATGGTCATTTTAAGGTTCTCCGAAATTTTTGGTATTCATGAACCTTTGAGAAAGGGAGGGAGGAGAGAGCATCGATCTTCTATTCCTAGAGATAGATACAAGTCTTTAAATTTATCTGATATTGTAGAAGAGGATGAAGAGGCATTCCTAAGGAGCTCTTCTCATGATCTCTTTGTAAACGAACAGGCTTGTGTGGGCCAAAATGGTATATCAGAGAGTAACGATGCTGACTTGGATTTTTCAAAATTTGGATTTCTTCATGGGGATGCCTCGATGGCTGTGAAAGATTTTAGACAACTAAAGGACTCTTGTCTTAGTTCTGAACCAATGAAAGATGATTTGACAGGTCCTTCCTGGGACGAGCATTCTCTCCTGTGCACTGACTTTTATCCTCTTGATCAGCAAGACTGGGAGGAAGAAATCCTTTGGGGCAATTCCCCTGCTGCAAGTGACAATGATTTTGAAAGCTTTGAAATTTCTGGACCAGATTTTGGACCTTCAGGTTGTGGTGAACTGGAAATTGAAAGTGGGATGCAAAATATCCAGTTGGAGCCACAGAAAGAATTCGAGGAGAAAGGTCATAGTGTTTTCTTGTGTAGCTCTCCTGTCCAATTGGAGCCCTTTGGCTCAAGGGATACTTCAGGGGCTATAACCAATTCATTGTCAGAGAATTTATTTCATCCCCAACTCTTGAGGTTAGAATCCAGACCTGAAGTGGATATCTCTAATCTTGTAGATGGCAGGAGGGAGAATATATCTGAGGAGCATAATCAAAGTGGTCTAGTAAAGCATTTTACTAAAGTTACCGTACAAAACCAAGATATGAAGGAAGGGTCTTGGATAGACAAGATTATATGGGAGGAAGTCGATAGACCTTTTGTGAAACCAAAGCTAATATTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTGGATAGCAAAGATAGTAGACATCTTCACCTACATGCAGGGGCTATGATCTTAAATCGTTCCTTAAAATCGGGCATTGGAGAGTCCTCTGAGCTACCTGGCCCTGGAGGTCAATATGGATGGAGATCCATTGCTAATGACAAACATTATTCAAGTAGGAAAACTTCTCAGCAACTGAAATCAAATTCTAAAAAGCGCTCTGCTCATGGTGTCAAAGTTTTTCACTCTCAACCTGCATTGAAGCTGCAGACAATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGACCGAGAGCTTTATGGTATCCCCATGACAATGAGGTGGCTGTCAAAGAACAAGGAAAACTACCGACACAAGGACCCATGAAAATTATTATGAAGAGCTTGGGTGGCAAGGGGAGTAAACTGCATGTTGATGCTGAAGAGACTCTCTCTTCTGTTAAAGCAAAAGCTTCTAAAAAGCTAGATTTCAAACCACTGGAAACAGTAAAAATATTTTATCTAGGGAAGGAGCTTGAAGACCAGAAATCACTTGCGGCACAAAATGTTCGACCAAACTCCTTGTTACATCTTGTTCGTACAAAGATACATTTGTGGCCAAGGGCACAAAGGGTTCCTGGCGAAAACAAATCTTTGCGTCCTCCTGGGGCATTCAAGAAGAAGTCTGATTTATCTGTGAAAGATGGACACGTTTTTCTAATGGAGTATTGTGAGGAAAGACCTTTGCTTTTGAGCAATGCTGGAATGGGTGCCAGACTCTGTACATACTATCAAAAAAGTTCTCCAGATGATCAAGCTGGCTCCTTATTACGCAACAAAGATAGTAGCTTGGGGCATGTCATTTCTCTGGATCCTGCTGATAAATCTCCATTCCTTGGAGATTTAAAGCCTGGTTGCAGTCAGTCATCACTTGAGACAAACATGTATAGAGCACCTATATTTCCTCATAAAGTGCCATCAACTGACTATCTGCTAGTTCGTTCATCAAAGGGAAAGCTATCATTAAGACGCATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTTATGGAGGTATTATCACCTGGGAGTAAGAATCTTCAGACATATATGATGAACAGGCTACTGGTACACATGTGCCGTGAATTTCAAGCTGCAGAGAAGCGTCACTTGCCTCCATGCATCCGTGTTGATGAACTGCTGTCCCAGTTTCCTTACCTATCAGAAGCCTCTTTTCGCAAGAGAATTAAGGAATATGCCCATTTACAGAAGGGAACGAATGGACAGTCAATTTTGGCTAAAAAACGAAATTTTCGGATGTGGTCGGAGGATGAATTGAGAAAAATGGTGACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGTCTCTACCGTCTGAAACATTTAGGAATAACTGAAACACACCCTACCAATATATCTTCTGCTATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCCGCTGCATCACACATTGAGAGGGAGCTGCAGATTACTCCATGGAACTTGAGTAGCAATTTTGTCGCCTGCACAAGCCAGGGGAAGGAAAATATTGAACGAATGGAAATTACTGGTGTTGGTGATCCATCCGGCCGTGGCTTGGGTTTTAGCTATGCTCGAGCTCCTCCAAAGGCACCAGTGTCAAGTGCAGTGGTGAAGAAGAAAACAGCTGCTGCCAGGGGAGGTTCTACTGTCACTGGAACAGATGCTGATCTACGTAGATTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAAGAAGTCATTGCAAAACAAACCAGGTGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGACCCAACAACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTCCAGCTACAGCAGCAGACCCGAGAGAAGTGCCAGGAGATTTGGGATCGACAAGTTCAGAGTCTTTCAGCTTTAAATGGTGATGAAAATGAGAGTGATTCTGAAGGAAATAGTGATCTAGATTCTTTTGCTGGTGATCTAGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGAGAAGAGGGTACCAATGATTTCAAACGTGACAAGGTGGATGGTGTTAAGGGTCTTAAAATGAGAAGACGGCCAACCTTAGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAGGCTGCTGAATTATTCAGGTTACTCATGGATGATGATGAAGATGACAGGAAGAAAAAGAAGAAGAATAGAGGTGTTGTGGAGGAAGTAGGATTAGTGTCAAAACTACAACCAAGATTTGTCTATGACAACACAGATCAATTTAAGCAAATAACTAATGCGGTACAACTAGATGGAACCATTATTCTGAAAGAAAATACAATTGCAAATCTCAGAGAGGAGGAAGGTAGTTCGGCTAAAAAAAGCAAATCAGTGAAGGTCAGCAAAACAAAGAAGAGTGACCTTTCGCCTATTAGCCTACCAAATAAAAAAATAAAATTAAATATCGGGGATGGACCCAAGGTATTCAAGGAGAAAAAACCATCGAGGGAAAGTTTTGTTTGTGGAGCATGTGGTCAGCTTGGGCACATGAGAACAAACAAGAACTGTCCAAAATATGGTGAAGATCTAGAAGCACAATTTGAATCTACGGACATGGAAAAAACAGGTGGAAAATCAAGCTCTTTGGATCCCTCTGGTCAGTCCCAGCCGAAAGTTCTCTCCAAAAAGCTATTATCAAAAAGCTCAACAAAAATTGCTCAGGTTGAATCTCCTGAGGGAGAAAAATCTGGTTTGAAGGCAAAAGTTCTTCCAGTGAAGTTCAAATGCAGCTCCGCTGAAAAGCTTCCTGATAAACCTGCAACAGAGGCCACACAGAGTTCTGATAAGCCAGTCACTTCTGACTCAGAAACTGCCAAGTCGACTAAGGTTAATAGAATTTTAATTCCCAAGAAAGGGAAGCCAGATGATATGCAGGCTGAATCTCGTAAGCGTGCTATAGCTATACGGCCTCCCACGGATACGGGAAGAGGTCAAGTTGATTCTCATAAGCGGTCAATTATAATACGACCGCCTGCAGAAACAGATAGGGAGCAACCTCACAAGAAGATTATTATAAAACGCACAAAGGAGGTTACTGATCTGGACCAGGTCAGTCCTGGTGAAAACACAGGATTTGAACACAGAAAAACTAAAAGAATTGTTGAATTGTCGAATTTTGAGAGGCACAGAAAACAGGAGACCATGTATTCAGCTGAAGCACTGGTTAAAAAGAAAGCTAAAGAGGATAGAAGATGGTGGGATGAGCAGAAGAGGAGAAATGAAGAAAGACTCAGAGAAGACCGGGCAAGGAGGCATCATGAAGAAGAAATGAGGATGTTAAAAGAGCAAGAAAGGTTAGTGGAGATAAAAAGATATGAAGAAGATATTAGGAGAGAGAGGGAGGAGGAAGAACGGCAGAAAGCAAAAAAGAAAAAGAAGAAAAAGGCCGAGTTTAGAGACGACTATTTAGATGACCCCAGAACAAGAAGATTTGATGACAGGGTGCTAGAAAGAGATCGGAGTGGGAAAAGGAAATCTGTCGTCGAGTTGGGAAGGTATGCCGCAGACTATACACCACCAACGAAACGGCGTAGAGGAGGTGGCGGAGAGGTTGGGTTGGCAAATATTTTAGAGCGCATTGTGGATTCCCTGAAAGATAGGTACGACCTGTCCTATCTTTTCTTGAAACCAGTTTCCAAGAAAGAAGCTCCAGACTACCTGGACATCATAGAGAGGCCAATGGATCTTTCGAGAATTCGGGAGAAGGTTCGGAACATGGAGTACAAGAGCCGCGAAGACTTCCGACATGACGTCTGGCAGATTACTTACAATGCCCATAAATACAACGATGGTCGAAACCCTGGAATTCCTCCCCTTGCAGATCAGCTTCTGGAGCTTTGTGACTATTTGTTGAACGATAATGATGATAGCCTCACTGAAGCAGAAGCTGGTATTGAATCTCGGGAATTCTAG 5940 0.4286 MATPIVYCRCYGATGRGLGFRKKGEIAFKGSLSKLRSLSRGTDWEIQRANCNSSPAGARARARARARARNLPPTLFCFVLGVGVYLHNMGYDSDSPSQDGREEDDDEEYEEAGKGNRLLGFIFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPKTPPGIVEQDYGEKAEDAVDYEDIDEEYDGPETETANEVDYLLPKKEFFSVGASLEALKSRSSVFDDEDYDEDSEKEQDLVNSNSEVDNVSLTGEQVESVVDTSKGKGAQELDSHDVSQQSEELDTDVQKPQEDGPGVLKGSTPLPILCVEDGMVILRFSEIFGIHEPLRKGGRREHRSSIPRDRYKSLNLSDIVEEDEEAFLRSSSHDLFVNEQACVGQNGISESNDADLDFSKFGFLHGDASMAVKDFRQLKDSCLSSEPMKDDLTGPSWDEHSLLCTDFYPLDQQDWEEEILWGNSPAASDNDFESFEISGPDFGPSGCGELEIESGMQNIQLEPQKEFEEKGHSVFLCSSPVQLEPFGSRDTSGAITNSLSENLFHPQLLRLESRPEVDISNLVDGRRENISEEHNQSGLVKHFTKVTVQNQDMKEGSWIDKIIWEEVDRPFVKPKLIFDLQDDQMHFEVLDSKDSRHLHLHAGAMILNRSLKSGIGESSELPGPGGQYGWRSIANDKHYSSRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEVAVKEQGKLPTQGPMKIIMKSLGGKGSKLHVDAEETLSSVKAKASKKLDFKPLETVKIFYLGKELEDQKSLAAQNVRPNSLLHLVRTKIHLWPRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKSSPDDQAGSLLRNKDSSLGHVISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFPHKVPSTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPCIRVDELLSQFPYLSEASFRKRIKEYAHLQKGTNGQSILAKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKTAAARGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSALNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDFKRDKVDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELFRLLMDDDEDDRKKKKKNRGVVEEVGLVSKLQPRFVYDNTDQFKQITNAVQLDGTIILKENTIANLREEEGSSAKKSKSVKVSKTKKSDLSPISLPNKKIKLNIGDGPKVFKEKKPSRESFVCGACGQLGHMRTNKNCPKYGEDLEAQFESTDMEKTGGKSSSLDPSGQSQPKVLSKKLLSKSSTKIAQVESPEGEKSGLKAKVLPVKFKCSSAEKLPDKPATEATQSSDKPVTSDSETAKSTKVNRILIPKKGKPDDMQAESRKRAIAIRPPTDTGRGQVDSHKRSIIIRPPAETDREQPHKKIIIKRTKEVTDLDQVSPGENTGFEHRKTKRIVELSNFERHRKQETMYSAEALVKKKAKEDRRWWDEQKRRNEERLREDRARRHHEEEMRMLKEQERLVEIKRYEEDIRREREEEERQKAKKKKKKKAEFRDDYLDDPRTRRFDDRVLERDRSGKRKSVVELGRYAADYTPPTKRRRGGGGEVGLANILERIVDSLKDRYDLSYLFLKPVSKKEAPDYLDIIERPMDLSRIREKVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLNDNDDSLTEAEAGIESREF 1979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3046 1979 ProSiteProfiles Bromodomain profile. 1875 1945 IPR001487 GO:0005515
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 1443 1463 - -
Bisa01g3046 1979 CDD Bromodomain 1865 1960 - -
Bisa01g3046 1979 Pfam TATA box-binding protein binding 105 149 IPR009067 -
Bisa01g3046 1979 Coils Coil 1357 1377 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 1652 1690 - -
Bisa01g3046 1979 SMART ubq_7 755 827 IPR000626 GO:0005515
Bisa01g3046 1979 Pfam Bromodomain 1866 1941 IPR001487 GO:0005515
Bisa01g3046 1979 SMART bromo_6 1855 1965 IPR001487 GO:0005515
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 274 296 - -
Bisa01g3046 1979 Coils Coil 1771 1810 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 249 266 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 1596 1618 - -
Bisa01g3046 1979 FunFam Transcription initiation factor TFIID subunit 1 1819 1975 - -
Bisa01g3046 1979 SUPERFAMILY Bromodomain 1846 1967 IPR036427 GO:0005515
Bisa01g3046 1979 Gene3D - 737 827 - -
Bisa01g3046 1979 SUPERFAMILY Ubiquitin-like 725 825 IPR029071 -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 156 181 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 1787 1808 - -
Bisa01g3046 1979 CDD Ubl_TAFs_like 755 826 - -
Bisa01g3046 1979 Gene3D - 109 156 IPR036741 -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 680 700 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 1528 1565 - -
Bisa01g3046 1979 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 101 1977 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Bisa01g3046 1979 ProSiteProfiles Ubiquitin domain profile. 755 825 IPR000626 GO:0005515
Bisa01g3046 1979 ProSitePatterns Bromodomain signature. 1880 1937 IPR018359 -
Bisa01g3046 1979 Gene3D - 1850 1978 IPR036427 GO:0005515
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 91 112 - -
Bisa01g3046 1979 Pfam Ubiquitin family 759 827 IPR000626 GO:0005515
Bisa01g3046 1979 Pfam Protein of unknown function (DUF3591) 674 1241 IPR022591 -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 229 305 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 1525 1705 - -
Bisa01g3046 1979 FunFam Transcription initiation factor TFIID subunit 1 737 827 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 1624 1645 - -
Bisa01g3046 1979 MobiDBLite consensus disorder prediction 680 694 - -
Bisa01g3046 1979 PRINTS Bromodomain signature 1878 1891 IPR001487 GO:0005515
Bisa01g3046 1979 PRINTS Bromodomain signature 1892 1908 IPR001487 GO:0005515
Bisa01g3046 1979 PRINTS Bromodomain signature 1908 1926 IPR001487 GO:0005515
Bisa01g3046 1979 PRINTS Bromodomain signature 1926 1945 IPR001487 GO:0005515
Bisa01g3046 1979 SUPERFAMILY TAF(II)230 TBP-binding fragment 112 150 IPR036741 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3046 755 825 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 39.437 4.67e-08 52.8