Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3042 ATGGCGGACATTGAGAAAGAGAGGGCGTCAGAGCGAGAGCTCTATGCAAATGGAGTTCGGATGAGCACTGAAGAAGTTGAAGCAAAGCTTGACCAAGGAAAAATTCAAGAGGCAGAATCTGCAGTACGTGAAGGCCTATCCATCACTTCTGAGGAGGCAAGAACTCTTCTTGGGAAGTTGGAATATCAGAGAGGTAATTTGGAAGGTGCTCTTAGTGTGGTTGAAGGGACTGATCTCCAAGCTGCCATACAGCAACTGCAATCTATGGTTTCTGAGAGATCAGCGGCCAAGAAAGCACGCCCTCAAACAGCGGAAAATATCTCTCACCATGTTTCTAGTTTGATGCTAGAATCCATCTACATCAAAGCCAAGATTCTACGAAAGCAGGGGAAAATAAATGAAGCTATAACTGAATGCAAAAGTGCGGTCGAAGGCATTGAGAAGACATTTAGTCAGGGGGTATCTGATATACAATTGGATATTAAACTGCAAGAAGTAGTGAGCGACCTTGTAGGGCTGCTTCCAGAGCTTACAAAACAATCCGGTACACATGAGGAGGCACGGTCTGCTTATAGACGTGCCCTTCAACAACTTAGTCAATGGAACTTCGATACTGATGGGTGCGCAAGAATCCAGAAAGGGCTTGCAGTGTTTTTGCTGTACAGTGGGATGGAAGCTAGCCCACCCACTTCAACAGCTCAGGCTGAGGAGTCTTATGTACCTAAGAACAATCTAGAAGAGGCTATTCTTCTTCTAATGCTGGCTGTGAGGAAACTATGCGTTGAGAAGACCAAATGGGATCCTTCATTGATGGAGCATCTGACTTTTGCACTTTCAATATGTAGCCAAACTTGTGTGTTAGCAAAGCAACTGGAAGAGTTAATGCCTGGAATATTCCACCGTATTGACCGTTGGAACACTTTGGCTTTATGTCTCAGTGGAGCTGGACAGAACAAAGGTGCTTTGGAGCTGCTAAGGAAATCACTGCACAAACATGAAAGACCAAACGACATTATGCCATTGTTATTAGCTTCCAAAATCTGCAGTGAGGATGCTCATTTTGCTGGTGAGGGAGTGAAGTATGCAGAGAGGGCAATAAAGAACTCAAAGGGCATAGATGAGCATTTAAAAGGCACGAGTCTGCGTATGTTGGGACTTTGTATGGGAAAGCAAGCTAAGGTTGCTTCCTCTGACTTTCAAAGGTCGAGTCTACAGAGCAAAGCTCTGAAACTTCTAGATGCGGCAATGGGATTAGAGCAAAACAATTGTGATCTGTTTTTTGAGTTGGGTGTTTACTATGCAATGCATAGAAATTTGCCTACTTCATTGCGGTATGCGAAGCAGTTCTTTGATGAAACAGGTGGGTCTGTGATGAAAGGTTGGAAATTGCTGGCTCTGGTTTTGTCTGCTCAACAGAGATTTACAGAGGCGGAAGTGGTGATAAATGCTGCTTTAGATGAGACTGCCAAATGGGAGCAGGGGCCGCTGCTGAGACTGAAAGCCAAGCTCAAGAGCTCCCAGTCAAAACCCATGGACGCTATTGAAACTTATAGGTACCTCCTTGCGTTGATTCAAGTCCAGAGGAATTCCTTTGGGCCTCTCAAAGTAAATGAACAGGTTCAGGATGATGTAAATGAATCTGACGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTTTCTCATTGGAAGGATGCTGAAGTTTGTTTGCAAAAGGCCAGAGAGTTGAAGGAGTACTCAGCAGAAACAGTGCACACTGAAGGTCTGATGTCTCAAGGACTTGAGCAACCACAAGAAGCTATTGCTGCTTCCGCGAACGCTCTCCTACTTGAACCATACTACGTTCCAAGCAAGATCTTGCTGAGTGTTTTGATGCTCCAAATGGATTCAGAGACAAGTGCTTTGCCCGTAGCAAGAAGCTTACTTTCTGATGCACTTCGATTAGAACCCACAAACCGCATAGCTTGGTATTACTTGGGAAAAGTTCACAAGCGTAGTGGCCGAATAGGTGATGCTGCTGACTGCTTCCAAGCAGCTTTCATGCTTGAAGAATCCGATCCTCTTGAAAATTTCAGTAGTGTTCTTTAA 2088 0.4464 MADIEKERASERELYANGVRMSTEEVEAKLDQGKIQEAESAVREGLSITSEEARTLLGKLEYQRGNLEGALSVVEGTDLQAAIQQLQSMVSERSAAKKARPQTAENISHHVSSLMLESIYIKAKILRKQGKINEAITECKSAVEGIEKTFSQGVSDIQLDIKLQEVVSDLVGLLPELTKQSGTHEEARSAYRRALQQLSQWNFDTDGCARIQKGLAVFLLYSGMEASPPTSTAQAEESYVPKNNLEEAILLLMLAVRKLCVEKTKWDPSLMEHLTFALSICSQTCVLAKQLEELMPGIFHRIDRWNTLALCLSGAGQNKGALELLRKSLHKHERPNDIMPLLLASKICSEDAHFAGEGVKYAERAIKNSKGIDEHLKGTSLRMLGLCMGKQAKVASSDFQRSSLQSKALKLLDAAMGLEQNNCDLFFELGVYYAMHRNLPTSLRYAKQFFDETGGSVMKGWKLLALVLSAQQRFTEAEVVINAALDETAKWEQGPLLRLKAKLKSSQSKPMDAIETYRYLLALIQVQRNSFGPLKVNEQVQDDVNESDVWHGLANLYASLSHWKDAEVCLQKARELKEYSAETVHTEGLMSQGLEQPQEAIAASANALLLEPYYVPSKILLSVLMLQMDSETSALPVARSLLSDALRLEPTNRIAWYYLGKVHKRSGRIGDAADCFQAAFMLEESDPLENFSSVL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3042 695 Pfam Tetratricopeptide repeat 27 74 - -
Bisa01g3042 695 Gene3D Tetratricopeptide repeat domain 306 534 IPR011990 GO:0005515
Bisa01g3042 695 Gene3D Tetratricopeptide repeat domain 535 634 IPR011990 GO:0005515
Bisa01g3042 695 Gene3D Tetratricopeptide repeat domain 27 265 IPR011990 GO:0005515
Bisa01g3042 695 PANTHER PROTEIN NPG1 5 692 IPR043376 -
Bisa01g3042 695 Gene3D Tetratricopeptide repeat domain 635 693 IPR011990 GO:0005515
Bisa01g3042 695 ProSiteProfiles TPR repeat profile. 653 686 IPR019734 GO:0005515
Bisa01g3042 695 SUPERFAMILY TPR-like 462 684 IPR011990 GO:0005515
Bisa01g3042 695 SUPERFAMILY TPR-like 117 487 IPR011990 GO:0005515
Bisa01g3042 695 SMART tpr_5 116 149 IPR019734 GO:0005515
Bisa01g3042 695 SMART tpr_5 547 580 IPR019734 GO:0005515
Bisa01g3042 695 SMART tpr_5 581 614 IPR019734 GO:0005515
Bisa01g3042 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Bisa01g3042 695 SMART tpr_5 458 491 IPR019734 GO:0005515
Bisa01g3042 695 SMART tpr_5 302 335 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3042 Bisa-ChrBisa01 66281861 66289450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3042 12 695 Calmodulin-binding Proteins AT2G43040 64.826 0.0 872