Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2993 ATGACTCGTTTATCAAGAATTCTGGAATCGACACAAGCCGCCGCTCCGCCTCCGGAAGCAGTGGCCTTGGAATCGGACTTCGTGGTGATCCTCGCGGCTCTGCTCTGCGCACTGATATGCGTGGTTGGCCTCATCGCCGTCGCTCGCTGCACCTGGCTCCGGCGCCGCGGCCGCGGCGGATCCCCGAGGCAAGCTCTGGCGAACAAAGGTCTGAATAAGAAGGTGCTCCAGTCGATGCCTAAATTCACTTACATTAACAGCAATCCAGAGAAGTGGGTGGCCACGCCGGAGTGCGCGATTTGCTTGGCCGATTTCCTCGAAGGCGATGAGATCCGAATTCTGCCGCAGTGTGGTCACGGCTTCCACGTGGCGTGCATAGACACCTGGCTTGGGTCCCACTCTTCTTGCCCTTCCTGTCGGCAGATTCTCGCGGTAGCGGCGAGGTGCCAGAAGTGCGGCCTTCACCCGGCGGTTGGCGGAGGAGGAGCCGCCGCAAACGGTATTAGTGAACCGGAGCTCAAGTCCGGAGAAGACAGCAATGCCACTCCTGGTAATAGTAATAATAATTTTACTGACTCTATTAGCGATCACTACAGACACACACTTGGTAATGATTTCTTGCCATAA 627 0.5662 MTRLSRILESTQAAAPPPEAVALESDFVVILAALLCALICVVGLIAVARCTWLRRRGRGGSPRQALANKGLNKKVLQSMPKFTYINSNPEKWVATPECAICLADFLEGDEIRILPQCGHGFHVACIDTWLGSHSSCPSCRQILAVAARCQKCGLHPAVGGGGAAANGISEPELKSGEDSNATPGNSNNNFTDSISDHYRHTLGNDFLP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2993 208 MobiDBLite consensus disorder prediction 173 196 - -
Bisa01g2993 208 SMART FANCL_C_2 94 152 - -
Bisa01g2993 208 SMART ring_2 98 139 IPR001841 -
Bisa01g2993 208 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Bisa01g2993 208 MobiDBLite consensus disorder prediction 168 196 - -
Bisa01g2993 208 CDD RING-H2_EL5-like 97 140 - -
Bisa01g2993 208 Pfam Ring finger domain 97 140 IPR001841 -
Bisa01g2993 208 SUPERFAMILY RING/U-box 77 150 - -
Bisa01g2993 208 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 16 153 - -
Bisa01g2993 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 145 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2993 Bisa-ChrBisa01 64373700 64374326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2993 4 178 C3H Transcription Factor Family AT1G20823 57.447 4.91e-61 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1929 11 41636306 41636977 Bisa01g2993 01 64373700 64374326 CCT