Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2968 ATGTGGATGAGCAGCTTCACGCCTTCATCCATGTGGAAAGACATTTTTAAAGCAAACTATCTTATTACACCGTTGCTAAAATGGCAAGTAGCTTTAGGGGAATTGGATGGTAGCTTTTGAAGAGGCGACCATATATGTGCTTTGCTCATCCATCGACTGGGGCTGAATCAACCACCCTCTTCGGTTCTTTCATTGGCCGTGTTTGCTGCGATCCACGCCCTTGACCGTGATAGTTCTGGCACCTACTGTCTTCAGGTATCTTTACATTGGTCACACAGGTCAAAATTTGTAATAGAGAATCACACGTTAGACTCCGAGGCAGAAGTTGCTTTTGTAGACTCAAGAAAATCTGAGCTACCTGGATATGCTGTTTTAAATACATCTAAAGGCTCTATAGTAATAGAACTTTACAAGGAAAGCGCCCCTGAAGTTGTCGATGAATTTATTGACTTATGTCAAAAAGGGCACTTCAAGGGAATGCTTTTCCATCGTGTAATTAAGCACTATGTGATTCAGGCAGGGGATAACCAAGGGAACGGAGCTACTGAAGACTGGAACCTGAGAGGAAAGCATTATACAAGTCTGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGCAAACACTTGAATAAAAGATTTGATCTTTTCATTACAACTGCACCAATACCAGATCTAAATGAGAAGCTCATTGTATTTGGACGGGTCATCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGACGAACACTTCCAACCTAAAATCTCTATTGGGATACTTGATGTGACACTCAAACAGAAGATCTGA 819 0.4164 MWMSSFTPSSMWKDIFKANYLITPLLKWQVALGELDGSFXRGDHICALLIHRLGLNQPPSSVLSLAVFAAIHALDRDSSGTYCLQVSLHWSHRSKFVIENHTLDSEAEVAFVDSRKSELPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKGHFKGMLFHRVIKHYVIQAGDNQGNGATEDWNLRGKHYTSLKHEAFMLGTSKGKHLNKRFDLFITTAPIPDLNEKLIVFGRVIKGEDVVQEIEEVDTDEHFQPKISIGILDVTLKQKI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2968 272 SUPERFAMILY Cyclophilin-like 120 268 IPR029000 -
Bisa01g2968 272 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 162 174 IPR002130 GO:0000413|GO:0003755
Bisa01g2968 272 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 228 243 IPR002130 GO:0000413|GO:0003755
Bisa01g2968 272 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 IPR002130 GO:0000413|GO:0003755
Bisa01g2968 272 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 227 IPR002130 GO:0000413|GO:0003755
Bisa01g2968 272 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 119 268 IPR002130 GO:0000413|GO:0003755
Bisa01g2968 272 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 124 266 IPR002130 GO:0000413|GO:0003755
Bisa01g2968 272 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 89 272 - -
Bisa01g2968 272 FunFam Peptidyl-prolyl cis-trans isomerase 110 272 - -
Bisa01g2968 272 Gene3D - 108 272 IPR029000 -
Bisa01g2968 272 CDD cyclophilin 124 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2968 Bisa-ChrBisa01 62973718 62987128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2968 121 268 U-box Gene Family AT5G67530 30.519 3.66e-16 76.3