Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2962 ATGGGCACCAGAGAGTTCAACAGATTACGGGGTTTCACCACTTGTTGGAAGAAGAGAATTTCCCAAAGAGACGTGGAGAAAGACGAGTTCCAATATGCCAGTCCTCAGTGTCTCTCTTCCTACTACAGTGTCTTCGTGGTTCGCCTAGCCATCATGGTGATGCTAGCCATATTGATCGGCCTCCTCACTCTACTAACATGGCATTTCACCAAGATTTATACAAAGAAATCACTTGACAGCTTGGCATACGGCCTTCGTTATGAGCTTCTCCAACGCCCCATCCTACGGATGTGGAATATTTTGAACTCTACTGCTGAAATCACAGCCGCTCAAGTGAAGCTCTCTGAGTATGTTCTCAGACGCTACAACAACCCTGCTTCTCAAGCACAACAAGTTGAGCTATACGAAGCAATGAGAGCTGTGACATGGGCATTGTTTGCAAGCAACAAAGCTCTGAATTCAATAACGATCAGCTACAGAAACGGATTTGTGCAGGCATTCCATAGGGATGTGAAGGGAAACAACACATTTTACATCTACTCTGATCAAGCAAATTACTCCATAGGCGGTACTGCGAGACTGATCTCTACTCATGAAGCCTGGAATGACAAAGCCATTCTTGGAAACCATTCTGCCATCTGGTATCGCGAACCACTCAACCCGCTCAGCGGAGAGAAGATCGGAAAGCCGAAGCGAATAGCGCCGGACGACCTGATCAACATCGCCGGCATCTCGCAAGTGCCCGACGGCATAGCCTCGTGGCACGTGGCGGTGAGCAAGTTCACGGATTCGCCATTGCTCTCAGCAGCACTTCCCGTTTGGGACTCTTCCAACTCCAGCATTGTGGCTGTTGTTGGAGCCACCACTGCTCTCTACAGTGTGGGACAGTTGATGAAAGAGTTGGTTGAGTTTCACAGTGGTTACATGTATTTGACTTCCCAAGAGGGTTACTTGCTTGCCACTTCCACAGATGAACCTTTGCTTATCAACTCAACAATACCCCCCAAGCTTAAGATGGCCGTTCATTGTGAGGATGATGTGATCAGACTTGGAGCTCAGAGGTTACAGACAACTTATGGGAATAACTTCCCTCCAACTCATGAGGTTCATGTGGAGAATGCTTGGTTAGGCTCCCAGCAATATTACATTGACTCTTTCTTCCTCAAGTTGAAGAGACTTCCTCTGGTGGGTGTTATCATTATACCAAGAAAGTATATCATGGGAAAGGTAGATGAAAGAGCCTTCAAAACGTTGGTTATTTTGATATCAGCGTCCTTGTGTATACTATTTATTGGATGTGTTTGCATTTTGATACTCACTAATGGAGTATCAAAGGAAATGAAACTAAGAGCAGAACTTATCAGTCATCTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGTAACTATAAAAGTCAGTTTCTTGCAAACATGAGCCATGAACTGAGGACTCCTATGGCAGCAGTGATTGGATTGCTTGACATTCTCATATCTGACGATCGTCTCACAAATGAACAATTTGCATCAGTTACTCAGATAAGAAAATGCTCCACCGCCCTACTCCGTCTTCTTAACAACATTTTGGATCTCAGCAAGGTGGAATCTGGAAAATTAGTGCTAGAAGATGAAGAATTTGACTTGCGAAGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCACAATGTAGAGACCGTTTTAGACCTGTCTGACGATATGCCTAAGGTAGTTCGAGGTGATTCTGCAAGAGTAGTTCAAATTTTTGCAAATTTGATCAACAATTCCATCAAGTTTACTCCATCGGGTCACATTATTCTAAGAGGATGGTGTGAAAATGCAAACTCTTGTGCTGATACTGAAAATTTTCCTCTTGATCAAAAGAAATCCCGGAATGGACAGAAGATTAGAGCGAAGCAACATGAAAACCACTTAAAGAAGACACACAAAAAGGACAACAGAATGATTCTTTGGTTTGAAGTTGATGACACAGGCTGTGGAATTGATCCAAGTAAATGGGATTCTGTCTTCGAAAGCTTTGAGCAAGCAGATCCTTCAACTACTAGACTGCATGGTGGCACTGGTCTTGGACTTTGCATTGTCAGAACCCTGGTTAATAAAATGGGCGGAGAAATCAAGGTTGTGAAAAAAGAGGGCCCAGGAACCCTGATGCGATTATACCTGCTTCTCACTGCACCCATAGAGCCCACTGAACAACACGGTCGGTTAGATTATGCACACAATAGCTTAGTGGTATTGCTTGCACTACCTGACAATATGGGTCGAATAATCACATCTAAGTGGCTACAGAAAATTGGGGTTTGTACCACAGAGGCATCTGAATGGAATGGACTAACACAAACTCTTAGAGAACTCTTTCATGCAAGCTCAGTCCATAACAATGGCTTTGATGCATATTATTACCGAGTCAACGACAGCCTGAAGGCTAAATTGGTGGACATATCAGAGACGAAGAACCCTACTTTTGTCATTCTGGTTGACATAGGACTCCTTGACTTGAGCACAGATATTTGGAAGGAACAGCTTAACTTCCTTCACGAGTACTTTGGAAAAGCCAAGTTTGCATGGGTGCTAAATCATGACACCCCCAATACCATCAAGATGGAGCTTCGAAGGAAAGGCCATATTCTGATGGTCAACAAACCCCTTTATAAGGCTAAAATGGTTCACATTTTGGAAGCTGTCATAAAGGAGAGAAACCTTGACCTGCAAAAGAAAAACGCCACTATAAAAGAGAGCGACGTGCATGAGTTTCTTGAGATTAATGATTCTGCTCATTCTGATTCCGCTAGCTCTGATACTTCTGACATATCTGATATGGGTAGTTCTAATCCCACTGACAAAGAAAGAGAATGTATTGCAAAATCTCACCCATCTTCAAAGAACCAGATAAAGAACTGCTTAGTTGGATTAACTGATGAATCTTTGGAAGATAATAATGACATCGAAGATGCAGAACCAAAAGTAGAGTGCATTAAAGAAGCTTCCCTTCCAAGAGAAATTGAAGGGGAAGAATCTGAATGTGGGGAGACACAGAAAGTTAGAAGCTCAAGTAAAGAAGTGAATGGAAAGAAATCTCTTGAAGGCCTAAGGATATTGCTTGCTGAAGATACTCCAGTGCTTCAGAGGGTTGCGACCATAATGCTTGAGAAAATGGGAGCTTCGGTTGTTGCTGTAGGTGATGGACAGCAGGCTGTGAATGCTCTGAATTGCATGCTAAGCACAGAAGATTGTAGAAAGGAGTCTCTCTTGAAGGAAAGAAGCACAATAACTGAAACAGAAATTCTCACTCGCCCTCCTTATGACTTGATTCTAATGGATTGTCAGATGCCAAGGATGGATGGTTATGAGGCAACAAAGGCAATAAGGAGATCAGAAGCGGGAACAGGATTTCACATTCCCATAGTTGCTCTTACAGCCCATGCAATGTCATCTGATGAAGCTAAATGCTTGGAAGTGGGAATGGATGCTTATTTAACAAAGCCTATTGACTTCAACCTCATGCTCTCCACCATTCTTTCTCTCACTAAAACAACATTGTGA 3570 0.4317 MGTREFNRLRGFTTCWKKRISQRDVEKDEFQYASPQCLSSYYSVFVVRLAIMVMLAILIGLLTLLTWHFTKIYTKKSLDSLAYGLRYELLQRPILRMWNILNSTAEITAAQVKLSEYVLRRYNNPASQAQQVELYEAMRAVTWALFASNKALNSITISYRNGFVQAFHRDVKGNNTFYIYSDQANYSIGGTARLISTHEAWNDKAILGNHSAIWYREPLNPLSGEKIGKPKRIAPDDLINIAGISQVPDGIASWHVAVSKFTDSPLLSAALPVWDSSNSSIVAVVGATTALYSVGQLMKELVEFHSGYMYLTSQEGYLLATSTDEPLLINSTIPPKLKMAVHCEDDVIRLGAQRLQTTYGNNFPPTHEVHVENAWLGSQQYYIDSFFLKLKRLPLVGVIIIPRKYIMGKVDERAFKTLVILISASLCILFIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDRLTNEQFASVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDEEFDLRRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHIILRGWCENANSCADTENFPLDQKKSRNGQKIRAKQHENHLKKTHKKDNRMILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGPGTLMRLYLLLTAPIEPTEQHGRLDYAHNSLVVLLALPDNMGRIITSKWLQKIGVCTTEASEWNGLTQTLRELFHASSVHNNGFDAYYYRVNDSLKAKLVDISETKNPTFVILVDIGLLDLSTDIWKEQLNFLHEYFGKAKFAWVLNHDTPNTIKMELRRKGHILMVNKPLYKAKMVHILEAVIKERNLDLQKKNATIKESDVHEFLEINDSAHSDSASSDTSDISDMGSSNPTDKERECIAKSHPSSKNQIKNCLVGLTDESLEDNNDIEDAEPKVECIKEASLPREIEGEESECGETQKVRSSSKEVNGKKSLEGLRILLAEDTPVLQRVATIMLEKMGASVVAVGDGQQAVNALNCMLSTEDCRKESLLKERSTITETEILTRPPYDLILMDCQMPRMDGYEATKAIRRSEAGTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDFNLMLSTILSLTKTTL 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2962 1189 CDD REC_hyHK_CKI1_RcsC-like 1041 1181 - -
Bisa01g2962 1189 MobiDBLite consensus disorder prediction 930 966 - -
Bisa01g2962 1189 SMART HKATPase_4 582 734 IPR003594 -
Bisa01g2962 1189 PANTHER TWO-COMPONENT HISTIDINE KINASE 26 738 - -
Bisa01g2962 1189 MobiDBLite consensus disorder prediction 933 951 - -
Bisa01g2962 1189 PRINTS Bacterial sensor protein C-terminal signature 694 712 IPR004358 GO:0016310|GO:0016772
Bisa01g2962 1189 PRINTS Bacterial sensor protein C-terminal signature 677 687 IPR004358 GO:0016310|GO:0016772
Bisa01g2962 1189 PRINTS Bacterial sensor protein C-terminal signature 659 673 IPR004358 GO:0016310|GO:0016772
Bisa01g2962 1189 Gene3D - 1017 1186 - -
Bisa01g2962 1189 SMART REC_2 1039 1181 IPR001789 GO:0000160
Bisa01g2962 1189 Pfam His Kinase A (phospho-acceptor) domain 470 535 IPR003661 GO:0000155|GO:0007165
Bisa01g2962 1189 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 456 536 IPR036097 GO:0000155|GO:0007165
Bisa01g2962 1189 Pfam Response regulator receiver domain 1041 1180 IPR001789 GO:0000160
Bisa01g2962 1189 SUPERFAMILY CheY-like 1037 1185 IPR011006 -
Bisa01g2962 1189 Gene3D - 537 734 IPR036890 -
Bisa01g2962 1189 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 733 IPR003594 -
Bisa01g2962 1189 ProSiteProfiles Response regulatory domain profile. 1040 1185 IPR001789 GO:0000160
Bisa01g2962 1189 CDD HisKA 470 531 IPR003661 GO:0000155|GO:0007165
Bisa01g2962 1189 Gene3D - 457 536 - -
Bisa01g2962 1189 SMART HisKA_10 469 535 IPR003661 GO:0000155|GO:0007165
Bisa01g2962 1189 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 524 730 IPR036890 -
Bisa01g2962 1189 ProSiteProfiles Histidine kinase domain profile. 476 734 IPR005467 -
Bisa01g2962 1189 FunFam Histidine kinase 1-like protein 457 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2962 Bisa-ChrBisa01 62775973 62786522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2962 1 1186 Histidine Kinase Gene Family AT2G17820 65.132 0.0 1541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa01g2962 HATPase_c 1.2e-22 CL0025