Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2939 ATGGTGGACAATGGTTCCGGCGAGAAGGGGGTCACCTATCTTCACGGCGACTTGGAGTTGACCATCTTTGAGGCTCGAAGGTTGCCCAACATGGATCTTGTCTCCGAACATTTCCGCCGTTGTATCACTGTCTGTGACACTTTCAATTGCCGTTCCTCCGAATCCGGCAACGGTAGCAACCGCAAAATCCACCGCCGCCGGAAGATTATCACGAGTGACTCATACGTCACCGTTTCGGTGCCGCAGGCAACTGTTGCCCGCACACGTGTGATAAAGAATGCGCAAAACCCCCAGTGGAACGAGCGATTCAATATCCCCTTAGCGCACCCCGTGGTGGATTTGGAATTTCGGGTTAAAGACGACGACGTGTTTGGTGCTGAGCTTGTGGGAACTGTTAAAATTCCTGCACAGAGAATTGCCTCCGGTGAGTTTATAACCGGATGGTTCCCTATTATTGGATCATCCGGTAAGCCACCTAAGCCCGATAGTGCACTTCGTGTTGAAATGAAGTTCATTCCTTTTGAAGTGAACCCGCTGTACAAGCGAGGCATTGCGGCTGATCCGGAACACAAGGGTGTGAGGAAAACGTATTTTCCAGTGAGGAAAGGAAGCTCGGTAAGGCTGTACCAAGATGCCCATGTTTCTCTTGGGATTTTACCTGAGATTAAGCTGGATGGAGGCGAGGTTTATCGGCATGGAACGTGTTGGGAAGATATTTGTTATGCTATATCCGAGGCTCATCATATGGTTTATCTTGTGGGTTGGTCAATCTATCACAAAGTGAAGATTGTTAGGGAACCCAGCAGGCCTTTGCCACGAGGTGGGAATTTGACTCTTGGTGAATTGCTCAAGTACAAGTCTGAGGAAGGGGTGCGAGTTCTGTTGCTGGTTTGGGATGATAAGACTTCCCACGACAAGTTGTTCATAAAGTCGGCTGGAGTAATGCAGACTCATGATGAAGAAACCAGGAAATTTTTTAAACATTCTTCTGTTATGTGTGTTCTAGCACCTAGGTATGCTAGCAGCAAGTTGAGTTATATCAAGCAACAGGTTGTTGGAACTGTTTTTACACATCATCAAAAATGTGTTCTTGTGGACACACAGGCTTCTGGTAATAACCGTAAGATAACTGCATTTTTAGGAGGCCTTGATCTATGTGATGGTCGCTATGACACGCCTGAGCATCGACTTTTTCGTAATCTTGATACTGTATTTTCGGGTGATTTTCACAATCCTACGTTTTCAGCTGGAACAAGGGCTCCTAGGCAACCATGGCATGATTTGCACTGCAGAATTGATGGGCATGCTGCATATGATGTTCTTCTTAATTTTGAGCAGCGATGGAGAAAAGCAACAAAGTGGAAAGAATTTGGAATACTTTTTAAGAAGGCTTCTCATTGGCATGATGATGCTTTACTGAAAATAGAACGCATCTCATGGATATTGAGTCCTTCCTTGCCTCTCTCAAAGGATGGTACCACATTTATTCCTGGAGATGACCCTTCACTAAGGGTTACCAGTGAAGGTGATCCTGAAAACTGGCATGTTCAGATATTCCGCTCCATTGATTCCGGATCCCTGAAAGGGTTTCCCAAAATTGTTGATGCTGCTCAGTCCCAGAATCTTACCTGCTCTAAAAGTTTAATAATAGATAAAAGCATTCAAACAGGATACATTCAGGCGATCAGATCTGCTCAACACTTTATCTATATTGAAAACCAATATTTTCTTGGATCATCATATGCTTGGCCATCTTATAAAGATGCAGGGGCTGATAATCTCATTCCAATGGAATTGGCACTGAAAATTGCTAGTAAAATCAGAGCCAAGGAGAGATTTGCAGTTTATGTTGTTTTACCAATGTGGCCAGAGGGTGATCCTAATTCAGCAGCCATGCAAGAAATTCTCTTTTGGCAGGGCCAGACAATGCAGATGATGTATGGCGTCATTGCAAGAGAATTGAAATCACTGCAACTTGATGATTTGCGCCCACAAGATTACCTCAACTTCTATTGCCTGGGAAATCGGGAAGAATTTCATGAAGAAAGCTTAAGTTCCAATGGCGCTTCGGTCTCTAGTGCGCATAAATATCGTCGATTTATGATTTATGTGCATGCTAAGGGGATGATCATTGATGACGAATATGTTATAGTGGGATCTGCCAATATAAACCAGAGATCTATGGCTGGTACAAAAGATACTGAGATAGCTATGGGTTCATATCAACCTCATCACACTTGGTTTGCAAGGAAAAGACATCCACATGGTCAGATTTATGGTTACAGAATGTCACTGTGGGGGGAGCATTTTGGGAAGTTAGAAGCAAATTTTGAGGAACCAGAGAGTTTGGAGTGTGTGCGTAAAGTGAATGCAATTGCGGAAGAGAATTGGAAAAGATACACTTCTGAGGAGTTCTCAACGTTGCAAGGACATATTCTGAAGTATCCTGTACAGGTAGATGCTGATGGGAATGTTAGCCCTCTACCTGGACATGAAAATTTCATCGATGTTGGTGGTAAAGTACTGGGGACTTATTCCCCAACAATTCCAGACATTTTAACTACGTAA 2568 0.4385 MVDNGSGEKGVTYLHGDLELTIFEARRLPNMDLVSEHFRRCITVCDTFNCRSSESGNGSNRKIHRRRKIITSDSYVTVSVPQATVARTRVIKNAQNPQWNERFNIPLAHPVVDLEFRVKDDDVFGAELVGTVKIPAQRIASGEFITGWFPIIGSSGKPPKPDSALRVEMKFIPFEVNPLYKRGIAADPEHKGVRKTYFPVRKGSSVRLYQDAHVSLGILPEIKLDGGEVYRHGTCWEDICYAISEAHHMVYLVGWSIYHKVKIVREPSRPLPRGGNLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLFIKSAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKLSYIKQQVVGTVFTHHQKCVLVDTQASGNNRKITAFLGGLDLCDGRYDTPEHRLFRNLDTVFSGDFHNPTFSAGTRAPRQPWHDLHCRIDGHAAYDVLLNFEQRWRKATKWKEFGILFKKASHWHDDALLKIERISWILSPSLPLSKDGTTFIPGDDPSLRVTSEGDPENWHVQIFRSIDSGSLKGFPKIVDAAQSQNLTCSKSLIIDKSIQTGYIQAIRSAQHFIYIENQYFLGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYVVLPMWPEGDPNSAAMQEILFWQGQTMQMMYGVIARELKSLQLDDLRPQDYLNFYCLGNREEFHEESLSSNGASVSSAHKYRRFMIYVHAKGMIIDDEYVIVGSANINQRSMAGTKDTEIAMGSYQPHHTWFARKRHPHGQIYGYRMSLWGEHFGKLEANFEEPESLECVRKVNAIAEENWKRYTSEEFSTLQGHILKYPVQVDADGNVSPLPGHENFIDVGGKVLGTYSPTIPDILTT 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2939 855 Pfam Phospholipase D Active site motif 354 389 IPR001736 GO:0003824
Bisa01g2939 855 SUPERFAMILY Phospholipase D/nuclease 198 460 - -
Bisa01g2939 855 PANTHER PHOSPHOLIPASE D 9 843 IPR015679 -
Bisa01g2939 855 SMART pld_4 700 727 IPR001736 GO:0003824
Bisa01g2939 855 SMART pld_4 354 389 IPR001736 GO:0003824
Bisa01g2939 855 Gene3D Endonuclease Chain A 522 746 - -
Bisa01g2939 855 Pfam PLD-like domain 559 736 IPR025202 -
Bisa01g2939 855 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 173 IPR035892 -
Bisa01g2939 855 CDD C2_plant_PLD 10 172 - -
Bisa01g2939 855 ProSiteProfiles C2 domain profile. 1 149 IPR000008 -
Bisa01g2939 855 Gene3D C2 domain 14 180 IPR035892 -
Bisa01g2939 855 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 354 389 IPR001736 GO:0003824
Bisa01g2939 855 Pfam Phospholipase D C terminal 775 844 IPR024632 -
Bisa01g2939 855 SMART C2_3c 17 148 IPR000008 -
Bisa01g2939 855 FunFam Phospholipase D delta 226 470 - -
Bisa01g2939 855 PIRSF PLD_plant 3 855 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bisa01g2939 855 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 700 727 IPR001736 GO:0003824
Bisa01g2939 855 Gene3D Endonuclease Chain A 227 469 - -
Bisa01g2939 855 Pfam C2 domain 16 151 IPR000008 -
Bisa01g2939 855 SUPERFAMILY Phospholipase D/nuclease 554 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2939 Bisa-ChrBisa01 61923827 61932636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2939 11 691 Phospholipase D Gene Family (Wang group) AT4G35790 70.494 0.0 1035