Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2934 ATGGTGATCGAGGAAGACATTGAGAGCTGCGGGAGTCGAGCCGTACAGTCACAGCAAGCTCACCCTCGCCAGCACAGGCAGAAATTGAAGGTATACAATGAGGTGCTTCGTCGAATTCAAGAATCCAATTATGAGGAGGCAAATGTTCCTGGTTTCGATGACCATCTATGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTGAATGTGGAGAGGGCAGAGGATGTTCTTGCTCATCAGAGACTACTGAAGTTGGCGGAGGACCCTGCTAATCGACCTGTATTTCAAGTTCGCTTAGTACAGGTACATCCTTATGGTAATGCAAGTTATGTTGATTCCATGCATTCAGAATCAGATCCTTCCGAGAAGGAAGACGCACAGAGCTCTTTAAACTATTCTTTTACGAAGGGAATTCATCTTCTACCTACTTTCGGTTCCTCCTCTAATCTTGAAGCTCTTGCACTTAAAGCAAGTAAAAGTAATATTGAAGACGGAGACAGTGCTATTGGTGTGAAACCATATTCTCACCGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTTCTTAGTCAGTTAACTTCATTACTTGGTGAGATTGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCATTGATGGTTTTTCTCTGGATGTCTTTGTTGTTGAGGGCTGGCCAAATGAGGAAACTGAGGAGCTCAAGCGTGTATTGGAAAAGGAAATTTCAAAGTTTAAGAAGCAATATTTGTCACAAAAGGGCACACGTTATTCTGCCAACGACGGTCACCATGAAAGGATGGAACCCTTTCCTCATTGCATAGAAATACCATTTGATGGAACTGATGTCTGGGAAATTGATACCAACCAATTGAAATTTGGAAACAAAGTTGGATCTGGATCATTTGGTGATCTGTATAGAGGCACATATTGCAGTCAAGAGGTGGCTATCAAAGTCCTCAAACCTGAGCGCATAAATACAGATATGTTGAGAGAATTTGCGCAGGAAGTTTACATCATGAGGAAGATTCGACACAAGAATGTTGTGCAGTTCATTGGTGCATGTACTCGACCGCCAAATCTGTGTATTGTTACCGAGTTTATGTATAGAGGAAGCATATATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTGGCGATAGGTGTTTCAAAGGGAATGAACTATTTGCACCAAAATAACATAATTCACAGGGACCTCAAGACTGCCAATTTGCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACCGGAGAATTGCCTTACTCTTACTTGACCCCATTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGTCTGAGACCTACAATCCCCAAGAATGCGCACCCAAGACTTTCTGAACTCCTCCAATGTTGCTGGCGGCAAAATCCAACGGAGAGACCAGATTTCTTTGAAATAATAGAGATTCTTCAGCTGATAGCCAAAGAGGTTATTGATGAGAAAGCACATCGACACAAGGATAAATCATCCCACGGCTTTCTCTCAGCGCTTAAGTGGACCCATCACTGA 1737 0.4324 MVIEEDIESCGSRAVQSQQAHPRQHRQKLKVYNEVLRRIQESNYEEANVPGFDDHLWLHFNRLPARYALDVNVERAEDVLAHQRLLKLAEDPANRPVFQVRLVQVHPYGNASYVDSMHSESDPSEKEDAQSSLNYSFTKGIHLLPTFGSSSNLEALALKASKSNIEDGDSAIGVKPYSHRPMHEITFSTVDKPKLLSQLTSLLGEIGLNIQEAHAFSTIDGFSLDVFVVEGWPNEETEELKRVLEKEISKFKKQYLSQKGTRYSANDGHHERMEPFPHCIEIPFDGTDVWEIDTNQLKFGNKVGSGSFGDLYRGTYCSQEVAIKVLKPERINTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMYRGSIYDFLHKQRGVFKLPSLLKVAIGVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPTIPKNAHPRLSELLQCCWRQNPTERPDFFEIIEILQLIAKEVIDEKAHRHKDKSSHGFLSALKWTHH 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2934 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Bisa01g2934 578 Coils Coil 234 254 - -
Bisa01g2934 578 SMART serkin_6 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2934 578 CDD ACT_TyrKc 182 248 - -
Bisa01g2934 578 SUPERFAMILY Protein kinase-like (PK-like) 275 546 IPR011009 -
Bisa01g2934 578 Gene3D Phosphorylase Kinase; domain 1 287 374 - -
Bisa01g2934 578 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Bisa01g2934 578 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Bisa01g2934 578 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Bisa01g2934 578 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Bisa01g2934 578 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Bisa01g2934 578 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
Bisa01g2934 578 ProSiteProfiles ACT domain profile. 184 258 IPR002912 -
Bisa01g2934 578 CDD STKc_MAP3K-like 303 546 - -
Bisa01g2934 578 ProSitePatterns Protein kinases ATP-binding region signature. 303 324 IPR017441 GO:0005524
Bisa01g2934 578 Gene3D Transferase(Phosphotransferase) domain 1 375 572 - -
Bisa01g2934 578 Pfam Protein tyrosine and serine/threonine kinase 297 546 IPR001245 GO:0004672|GO:0006468
Bisa01g2934 578 ProSiteProfiles Protein kinase domain profile. 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2934 578 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 149 551 - -
Bisa01g2934 578 SUPERFAMILY ACT-like 182 254 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2934 Bisa-ChrBisa01 61784890 61793801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2934 2 577 MAP Kinase Kinase Kinase AT4G35780 71.256 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa01g2934 PK_Tyr_Ser-Thr 5.7e-73 CL0016