LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g2933	ATGGTGAAGAGGAAATGGGCCGTGAACTCGGCCTTCATGGCCCTATACGCCTTCGCGGCGGTGCTGGTGTGTTGGGTGTTATGGGCCCATGAAATGGCATTTGGGTCGACGATGATCCCGTGGGTGGGGAAGCCCAGGCAGGCCCTGACCCACAAGTTCCTGCTGGCTCAGTCGAAAGACGGGGAGTTTGCAATGGCGGACTTTGTGTTGTATCAATTTGCTTTTGCTGCGATTACGGTGATATTGCTGGCGGGGTCGCTGCTTGGGAGGATGAACTTCTACGCGTGGATGATGTTCGTGCCTCTCTGGCTGACGCTGTCTTATACCATAGGTGCCTTCAGCATTTGGGGGAGGGGCTTCCTTGAGCAATACATAATTGATTATGCCGGCGGCTTCGTCATTCATCTTTCTTCTGGTGTCGCCGGCTTCACTGCCGCTTATTGGAACTTCCCGCCTAATAACATAATACACATGCTTGGAGGTGCAGGGTTTCTGTGGATGGGGTGGGCCGGGTTCAACGGGGGAGCTCCGTTTAAGGTTGGGGACATGACTGCCTCTCTGGCCATCTTCAACACCCATCTCTGCACTGCCACCAGCCTCCTCGTCTGGCTTTCCCTCGACATGGTTGTCTATAATAAGAGCTCTGTTATAGGTGCTGTCCAAGGAATGATCACTGGTCTCGTTTGCATCACACCTGCTGCAGGGCTGGTGGATTCATGGGCAGCAATAGTGATGGGAGGTTTATCGGGTTCAATACCATGGTACACCATGATGGTTCTACACAGGAGATCGGCATTTTTCCAAAGTGTGGATGACACATTAGGTGTGTTCCACACTCATGCAGTGGCAGGAATTCTAGGAGGACTCCTTTCTGGCGTGTTGGCCAAACCCAATCTCTTGAACATGATGTATGGCCCGGATATCTCATACGGTCCAGGTTTATTATATAGTTTTAAAGAGGGGAAAGTGGGTCCTGGCTTCACCCAAGTAGGGTATCAGCTTTTGGGAGCCATCTTTGTGACTGTGTGGAACGCCATTATTACGAGCCTCATCTGTATTGTCATAAGCCGAATTGTGGATCTCAGGATGAAAGATGAAGACCTTGAGGTCGGTGACGATGCAGCTCATGGAGAAGAAGCCTATGCGTTGTGGGGTGATGGAGAGAGAATGCGAGTCCCCCTTCGTTTGCGTATTAGCCCAACACTTCCTTCCATGTGTCGTCGTCGAGTTTCTATTCCCACCACCACACAAAACATAGGGACAGGGTAG	1269	0.5146	MVKRKWAVNSAFMALYAFAAVLVCWVLWAHEMAFGSTMIPWVGKPRQALTHKFLLAQSKDGEFAMADFVLYQFAFAAITVILLAGSLLGRMNFYAWMMFVPLWLTLSYTIGAFSIWGRGFLEQYIIDYAGGFVIHLSSGVAGFTAAYWNFPPNNIIHMLGGAGFLWMGWAGFNGGAPFKVGDMTASLAIFNTHLCTATSLLVWLSLDMVVYNKSSVIGAVQGMITGLVCITPAAGLVDSWAAIVMGGLSGSIPWYTMMVLHRRSAFFQSVDDTLGVFHTHAVAGILGGLLSGVLAKPNLLNMMYGPDISYGPGLLYSFKEGKVGPGFTQVGYQLLGAIFVTVWNAIITSLICIVISRIVDLRMKDEDLEVGDDAAHGEEAYALWGDGERMRVPLRLRISPTLPSMCRRRVSIPTTTQNIGTG	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g2933	422	Gene3D	Ammonium transporter AmtB like domains	1	384	IPR029020	-
	Bisa01g2933	422	Pfam	Ammonium Transporter Family	1	381	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Bisa01g2933	422	SUPERFAMILY	Ammonium transporter	1	362	-	-
	Bisa01g2933	422	PRINTS	Rhesus blood group protein signature	281	297	IPR002229	GO:0005886
	Bisa01g2933	422	PRINTS	Rhesus blood group protein signature	188	210	IPR002229	GO:0005886
	Bisa01g2933	422	PRINTS	Rhesus blood group protein signature	72	88	IPR002229	GO:0005886
	Bisa01g2933	422	PANTHER	AMMONIUM TRANSPORTER MEP2	1	390	IPR001905	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g2933	Bisa-ChrBisa01	61508217	61509702	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g2933	65	389	Inorganic Solute Cotransporters	AT2G38290	56.548	3.83e-125	365