Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2921 ATGGTAGCTGGGACGCAGCAACAAAAGCCACAACCTCAATCGCAGCAGCAGAATCAGCAGACTACACCTTCTGCACAGGATGAGGCCTTGAAGAGGAATACGGATTGTGTCTACTTTCTTGCCTCTCCCTTGACATGCAAAAAGGGAAGTGAATGTGAGTACCGCCATAGTGAGTATGCACGGGTTAATCCCCGAGATTGTTGGTATTGGTTGAATGGTAATTGCTTGAATCCCAAATGTTCATTCCGTCATCCGCCACTTGATAGCTTCTTAGTGCCACAGGCAGCCAATGCTGGTGGATCATCAGCACCCTCATCACAGATTCCACCAACTTCTGTATCACATGCTCCAAATTCTGCAGTGCATGCACCTTATAATTCTAGCAAACAAGCTGTCCCTTGCATTTTCTTCCAGAAAGGGCTTTGCTTAAAAGGTGATAGATGTGCTTTCTTGCATGGACCAAATCCTAATGCCATTAATAAAGTTCCTTCGGCCCAGGTGACCAACCAGGGTACTGAGCCTCCAAGCTTGAAGAAGGTTTTTGGTGGCACTGAAAAGTCTACACAAGAAAGGAAAAATTTTCAAGCAAACATTGGAAAGTCAGTTGGAGGCTCTGAAGTTAAACCTGCTCAAACTGTTGAAACTGCTTCACAGAGAAATGTAGTTGCCACAGAGAGTCATGCACCACGACCTATGGGATTTGATAATGAGGCTTCTAGATTCAAGTTAACAAATACTCCACCTGTTACCAATGGAGCCTCTGTTGCGAGACCTAATCGTCTGCATCAACCTCATGTGTCGGATGATCATAGTTTCCACAATGGTAAGGAAAGTGATGAATTTTTGAGAGAATCCTCTCCTGGGTTTGATGTTCTTGTAGCTGATGAACTTAGGAATTCAGATTACTACAATAGAGATGATCAATTTGGAAAAATGAGAGGTCAAGATGGAATGAACTTGGACTCAGTTAATGAATATGACTTAGGACAGTCTGTGGATTATAAACCAGTAGCTGATATTGAGCAAGAAAGATATTGTGGGCCACAAAGTTATGACTCATATGATCAGATGCAAGAAACATATGTTTGGGATCAGCACAGGAATTCATCTGAAAGAATATTCAGGGCACCAGCTCATTTAGATAGGATCACTCACCGCAGATCTGGCAGTCCTGAAAATGTTAGGGTCTCAGATCTCCGACATCACCTATCGAAGCGCAGGAGGGTCAATGGTTTGAAATCTGTTGTTAGTCATGATTATGCCCTGCAGAGCCATGATGATGAGCAAAGTCAGCGGTTCTCTTCTAGAAAGGATTCACTACAGTTACCTCTGAATGAAAGCTCCCTCAGTAATCGCTTCCGAGGCAGGATAAAGCTTCCAGCAAATGTTGGTGATGATCACCTGGACAGGGAATCAGACAAGGGAAGAAATAGGAAAGCATTGTCACCTGGAACTATGCAGACCTCTCATCATGGAAGGCTCCGAGATAGATTAAGAGGGAGGCTACTAGAAGATTATGAGAGGAAAAGCTTCAGGGATCAACCAATGAGGAGAGACATAATTGGTGACCAAAACACTGACTTTGATGGACCGAAAAGTCTTGCTGAACTGCAAAGTGGAAAGAATACCGGCGGGTATAAGGAGCAGCAATCTCTTGGGAAGAGAAAAAGTTTTAAGGAACAACAACAATTTGAAGATGATTTTCTGTTTGAAGGTCCAAAACCTCTTAGTGAGATTTTGAAGGAGAAGAGAGCAGCTGGAGGTGAAGTGGATTCCAAGAGTGGAAAATCATCTGAGAATAAAGGAGAAAAAGGGGATAGAGAAGTTACAAATGGCCCAGAACATGCCTCTGTCACAGACACACAAAATGGCACTTTGCCTGAAACTAAGGAAGTTGTTAAGAACCAAATGCCAGTTAATATGGGAGAATCTAAGTTTCAGGTGGCTGACCCAGTTGGAAGAGATATTGACAAGACTGATGTAACTCATATTCAGTCATCTGAAGATGGAATAATCTATGATGAAGCGATAGAAGACCAGGAGTATGAAGGTGATGATCAGAAGGATGGCGATTTTTGTTATGAGCAAGGCGATGACTATAATTTTGATGAAGGTGAAAATCCAGAGCAGGAAGAATACATGGATGATGAAGACGGGGATGACTTTGCCAAGAAGATTGGTGTCGTGCTTACGTGA 2196 0.4294 MVAGTQQQKPQPQSQQQNQQTTPSAQDEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWYWLNGNCLNPKCSFRHPPLDSFLVPQAANAGGSSAPSSQIPPTSVSHAPNSAVHAPYNSSKQAVPCIFFQKGLCLKGDRCAFLHGPNPNAINKVPSAQVTNQGTEPPSLKKVFGGTEKSTQERKNFQANIGKSVGGSEVKPAQTVETASQRNVVATESHAPRPMGFDNEASRFKLTNTPPVTNGASVARPNRLHQPHVSDDHSFHNGKESDEFLRESSPGFDVLVADELRNSDYYNRDDQFGKMRGQDGMNLDSVNEYDLGQSVDYKPVADIEQERYCGPQSYDSYDQMQETYVWDQHRNSSERIFRAPAHLDRITHRRSGSPENVRVSDLRHHLSKRRRVNGLKSVVSHDYALQSHDDEQSQRFSSRKDSLQLPLNESSLSNRFRGRIKLPANVGDDHLDRESDKGRNRKALSPGTMQTSHHGRLRDRLRGRLLEDYERKSFRDQPMRRDIIGDQNTDFDGPKSLAELQSGKNTGGYKEQQSLGKRKSFKEQQQFEDDFLFEGPKPLSEILKEKRAAGGEVDSKSGKSSENKGEKGDREVTNGPEHASVTDTQNGTLPETKEVVKNQMPVNMGESKFQVADPVGRDIDKTDVTHIQSSEDGIIYDEAIEDQEYEGDDQKDGDFCYEQGDDYNFDEGENPEQEEYMDDEDGDDFAKKIGVVLT 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2921 731 MobiDBLite consensus disorder prediction 490 525 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 681 722 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 536 550 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 420 447 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 462 628 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 696 718 - -
Bisa01g2921 731 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 132 154 IPR000571 GO:0046872
Bisa01g2921 731 MobiDBLite consensus disorder prediction 614 628 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 552 567 - -
Bisa01g2921 731 SMART c3hfinal6 128 154 IPR000571 GO:0046872
Bisa01g2921 731 SMART c3hfinal6 31 58 IPR000571 GO:0046872
Bisa01g2921 731 SMART c3hfinal6 63 86 IPR000571 GO:0046872
Bisa01g2921 731 SUPERFAMILY CCCH zinc finger 129 153 IPR036855 GO:0046872
Bisa01g2921 731 ProSiteProfiles Zinc finger C3H1-type profile. 30 59 IPR000571 GO:0046872
Bisa01g2921 731 Gene3D - 17 88 - -
Bisa01g2921 731 Gene3D - 119 193 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 1 27 - -
Bisa01g2921 731 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 27 729 - -
Bisa01g2921 731 ProSiteProfiles Zinc finger C3H1-type profile. 61 87 IPR000571 GO:0046872
Bisa01g2921 731 MobiDBLite consensus disorder prediction 167 251 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 420 434 - -
Bisa01g2921 731 Pfam Zinc-finger containing family 31 86 IPR041686 -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 576 613 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 208 224 - -
Bisa01g2921 731 ProSiteProfiles Zinc finger C3H1-type profile. 128 155 IPR000571 GO:0046872
Bisa01g2921 731 MobiDBLite consensus disorder prediction 462 478 - -
Bisa01g2921 731 MobiDBLite consensus disorder prediction 96 122 - -
Bisa01g2921 731 FunFam Zinc finger CCCH domain-containing protein 17 24 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2921 Bisa-ChrBisa01 60576685 60580283 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa01g2921 zf-CCCH_3 2.4e-11 CL0537