Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2911 ATGAAGAAAGTTTGGCTTCTTGTGCTTGTGATTTTCTACTGCGGGATTAATTGTTCAAACGGATTCAGTGGGGTTTCTACAAGACCCAGTTCCGTTAACATTGGGGCAATTCTATCTTATAATTCAACCATTGGCAAAGTGGCAAAAGTTGCAATAGATGCAGCAGTGAACGATATAAACTCCAATCCAATGATTCTCAAAGGAACTAAGCTCAATATTTCAATGAAGGACACAAAATTCTCCACTGGATTTCTAGGCATCATTGATTCATTACTATTGATGGAAAAAGACACAGTAGCCATAATTGGCCCTCAGTACTCAGTTATGGCTCATGTGATTTCGCATATAGCCAATGAGCTACAAGTCCCTTTACTATCATTTGCAGCAACAGACCCAACCTTATCTTCTCTTCAGTTCCCATATTTTGTGAGGACAACACAGAGTGATATGTCTCAGATGGCTGTTGTGGCTGATATCGTTAACTACTACCAATGGAGAGATGTGATAGCCATTTACATCGACGATGATCATGGAAGAAATGGGATAGCCACATTAGGGGACAAGCTAGCTGAGAAGCGTTGCAAGATCTCATATAAAGCACCCCTTAAGCCAAATAACATAACCAGGGAAGAAATAAACAATGCACTAGTGAAGGTAGCTTTAATGGAGTCAAAGGTCATAGTCCTCCACATATACCCTGATTTGGGTCTAGAAGTACTCAATGTGGCTCAGTCTCTAGGCATGATGGTAAATGGGTATGTCTGGTTAGCCACTGATTGGCTTTCCACTATACTGGACACTGACCCAACTGTGTCTTCTTCACATGTCAATGACATCCAAGGTGTTATCACCTTGAGAATGTACACCCCCGAGTCTGAAACCAAAAGAAGCTTCAGTTCTAGGTGGAGTAATTTAACAAAGGAGAAAGCTCCTAATCAGGGTCCTTGTGGGTTGAACTCTTATGGCTTACATGCATATGACACTGTGTGGGTTCTTGCTCATGCACTTGATGGATTCTTCAACAGTGGAGGAAGCTCGTCATTTTCAAACGACTCAAGTCTAAACATGTTAAGAGGGGATAGCTTACATCTAAATAACATAGGCGTATTTACTAACGGTAGTTTACTGTTACAAAAAACCAGAGCGGTGAATATGAGTGGTTTAACAGGTTCAATGGAGTTCAGTTCAGATGGTGAACTCATGAATCCTGCATATGAAGTTATTAATGTTATAGGAACAGGGATAAGGAGGATTGGGTATTGGTCAAATTCCTCAGGCCTTTACACTAATCATTCTAACCCCAATTCAAGTAAAGGGCTTTTTGGGGTGATTTGGCCAGGCCAAACCACTAAGACGCCACGAGGCTGGGTTTTTGCTGGGAATGGGAGGCATTTGAAAATAGGGGTGCCTCTTAGAATCAGTTATCGGGAATTTGTGTCCAAAATCGAAGGATCTGAAATGTTTGGAGGTTACTGCGTGGATGTGTTCACTGCTGCACTCGACTTGTTGCCTTATGCAGTTCCTTACAAGTTTTATCCATTTGGGGATGGTCGAACTAACCCATTAAATTCGGTGCTTCTGCACATGATCACAACTGGTGAGTTTGATGCAGTGGTAGGGGACATTACCATCACAACAAACAGGACAAAGATAGTGGATTTTACTCAACCATATATTGAGTCTGGGCTAGTTGTGGTGGCCCCTATCAGGAAGCTCAACTCCAGTGCCTGGGCTTTCTTGAGACCATTCACTCCCATGATGTGGTTCGTGACGGGTATGTTCTTCTTTGTTGTGGGAGCAGTTGTGTGGATCTTAGAGCGTCGGGTAAACGATGATTTTAGAGGCCCTCCCAGAAGACAGTTCGTTACCATTATATGGTTTAGCTTCTCAACTCTGTTTTTTGCACATAGAGAGAAAACAGTGAGCACCCTGGGTCGGTTAGTGCTAATCATATGGCTATTTGTGGTTCTAATACTGAACTCAAGCTACATAGCCAGCCTGACCTCAATTCTCACAGTGGAACAGCTGTCTTCCCCTGTGAAGGGAATCGAAAGCTTAGTGACGAGCCACGAGCTGATTGGTTTTCTTCGGGGTTCCTTCGCTGAGAATTACCTCACTGATGAGCTCAACATACACAAATCAAGGCTTGTCCCTCTTAACTCTCCTGCTGAATATGAGAAGGCCTTAAGGGATGGCCCTGCCAATGGGGGTGTTGCTGCAATCATTGATGAGCGAGCATACATGGAGCTATTCCTAGCAACCAGATGTGAATTCGGGATCGTTGGTCAAGAGTTCACCAAAATGGGATGGGGTTTTGCCTTCCAAAGGGACTCTCCCCTAGCAATTGACGTGTCAACAGCAATTTTAAAACTGTCTGAGAATGGGGATCTCCAAAGAATACATGACAAATGGCTATCAAGAAGTGCATGCAGCTCAGAAGGCGCAAAGCAAGGCGTAGACCGACTGGAGCTGAAGAGCTTCTGGGGTCTCTTCCTTCTGTGCGGCATAGCCTGCTTCATGGCTCTCCTCTGTTACCTCATTCGAATGGCCTACTCTTTCAGCCGTCACTCCGATCGCAATATCCGCAGCTCGTCCCGCTCCGCCCGCCTCCGCTCCTTTCTATCCTTTGTCAATGAAAAGGAAGACGACGACAAGATCGGCAGAACCAAGAGAAGGCGCAAGGACAGAGGGTCTAGTAGAAAGGTTGTGCATGAAGATGGGTCACCCGAACCCGAGTTGGATATTGGCCCCGATGGTAATCTTCATTTTGAAATTGATTCCCACTGCTAA 2790 0.4452 MKKVWLLVLVIFYCGINCSNGFSGVSTRPSSVNIGAILSYNSTIGKVAKVAIDAAVNDINSNPMILKGTKLNISMKDTKFSTGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLSSLQFPYFVRTTQSDMSQMAVVADIVNYYQWRDVIAIYIDDDHGRNGIATLGDKLAEKRCKISYKAPLKPNNITREEINNALVKVALMESKVIVLHIYPDLGLEVLNVAQSLGMMVNGYVWLATDWLSTILDTDPTVSSSHVNDIQGVITLRMYTPESETKRSFSSRWSNLTKEKAPNQGPCGLNSYGLHAYDTVWVLAHALDGFFNSGGSSSFSNDSSLNMLRGDSLHLNNIGVFTNGSLLLQKTRAVNMSGLTGSMEFSSDGELMNPAYEVINVIGTGIRRIGYWSNSSGLYTNHSNPNSSKGLFGVIWPGQTTKTPRGWVFAGNGRHLKIGVPLRISYREFVSKIEGSEMFGGYCVDVFTAALDLLPYAVPYKFYPFGDGRTNPLNSVLLHMITTGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKLNSSAWAFLRPFTPMMWFVTGMFFFVVGAVVWILERRVNDDFRGPPRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSHELIGFLRGSFAENYLTDELNIHKSRLVPLNSPAEYEKALRDGPANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFAFQRDSPLAIDVSTAILKLSENGDLQRIHDKWLSRSACSSEGAKQGVDRLELKSFWGLFLLCGIACFMALLCYLIRMAYSFSRHSDRNIRSSSRSARLRSFLSFVNEKEDDDKIGRTKRRRKDRGSSRKVVHEDGSPEPELDIGPDGNLHFEIDSHC 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2911 929 Gene3D - 576 708 - -
Bisa01g2911 929 Gene3D - 458 575 - -
Bisa01g2911 929 FunFam Glutamate receptor 460 576 - -
Bisa01g2911 929 FunFam Glutamate receptor 148 307 - -
Bisa01g2911 929 Pfam Bacterial extracellular solute-binding proteins, family 3 526 806 IPR001638 -
Bisa01g2911 929 PIRSF IGluLR_plant 1 913 IPR017103 -
Bisa01g2911 929 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Bisa01g2911 929 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Bisa01g2911 929 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 325 337 - -
Bisa01g2911 929 MobiDBLite consensus disorder prediction 899 919 - -
Bisa01g2911 929 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 866 IPR015683 -
Bisa01g2911 929 SUPERFAMILY Periplasmic binding protein-like I 28 456 IPR028082 -
Bisa01g2911 929 FunFam Glutamate receptor 702 809 - -
Bisa01g2911 929 Gene3D - 50 402 - -
Bisa01g2911 929 FunFam Glutamate receptor 576 706 - -
Bisa01g2911 929 CDD PBP1_GABAb_receptor_plant 33 427 IPR044440 -
Bisa01g2911 929 Pfam Ligand-gated ion channel 807 838 IPR001320 GO:0015276|GO:0016020
Bisa01g2911 929 Pfam Receptor family ligand binding region 50 412 IPR001828 -
Bisa01g2911 929 CDD GluR_Plant 465 805 - -
Bisa01g2911 929 Gene3D - 148 427 - -
Bisa01g2911 929 MobiDBLite consensus disorder prediction 883 919 - -
Bisa01g2911 929 Gene3D - 753 812 - -
Bisa01g2911 929 SUPERFAMILY Periplasmic binding protein-like II 440 807 - -
Bisa01g2911 929 SMART GluR_14 466 807 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2911 Bisa-ChrBisa01 59486743 59492701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2911 5 900 Ion Channels AT3G51480 58.727 0.0 1085