Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2910 ATGCGACGGAGGCACAATTTGTTTGTTGCTGAGGGTGGAGGGGGCGCCTGCATTGCAATTGCATCAATAGGAAGTGGGGTCTATCTGCTTTTGATCGTGCAGAAAAAGTGTGGCCAACAGCCGTATTGGGTTCACATTTTTCATTTCATTTTCTGGGTTTTCTGGATTTACTCCTCTTATGGTGATGCCCAGGTTTTACGGAATGTTGATGGCCTTGCTCTGGTTGGAGTTTATCCCCATTTGAACCATACTTGCAGCTTAATGCAACTTCCAACCATGATTGGAGTTTGGCTTGTGGTGTTAATGGTCTTCTCTAATGGGCTTTCTTCATCTGGGGTTGGCATGAATTATTCAGCAATACCTGAATTTGTAAATATTGGGGCTCTTTTCTCTTTCAATACCACCGTCGGTAGAATTGTCAAAATAGCTATTGAAGCAGCTATCGAAGATGTAAATGCTGATCCTTCCATTCTTGGTAAAACCAAGCTGAGGGTCTCAATGCAAGAGGATTCCAAATACAGAGGCTTTTTGAGCATTGCTGAGGTCTTGCAGCTCATGTCAAGACACACTGTGGCTGTAATTGGCCCCCAGACATCTACAACAGCTCATGTCATATCTCATGTTGCAAATGAGCTCCAAGTTCCATTGCTATCATTTTCAGCAACAGACCCCACCCTTTCTTCACTTCAATTCCCATTCTTTGTTAGAACTGCTCCCAGTGATATTTATCAGATGACTGTGATTGCAGAGCTAGTAGACTTCTACGGGTGGAGAGAGGTTATTGCACTCTATGTCGATGATGACCATGGGAGAAATGGAATTGGAGCATTAGGGGATAAGCTTGCAGAGAGACGTTGTAAAATCTCATACAAAGCACCTATTAGCCCTGAACCAACTAGAGAGGAGATTGCTGATGTGCTAGTTCAGGTGGCGCTTGCTGAATCTCGGATTATTGTCTTTCACAGTAATGCTGCCTGGGGACCAAGGGTGTTCAGTGTGGCAAAGTATCTTGGGATGATGGGAAGTGGGTATGTCTGGATAGCCACTAACTTTGTCTCTACTCTACTGGATACAGAGAGTCCCCTCCCTTCATATGAAATGGATGACATTCAAGGAGTTCTAACACTACGCGTGCACACAGCAGATTCGGAGGTCAAAAGAAGGTTTTTTGCTAGGTGGAAAAACTTGACTAGTGGAATGACTTCTAATGGCCCCCTTGGATTGAGTACTTTTGGTCTCTATGCATATGATACTGTTTATGTGCTTGCTCATGCACTTGATACATTTTTCAAACAAGGAAACCGAATCACATTCTCATATGACTCAAAGTTATCAGAACTACATGGAGATAGCTTGCATCTTGATGCGGTGAACATCTTTGATCAAGGAAATCTGTTGCGTAAAACTATTTATGAGGTTAACATGACTGGTGTAACAGGACACATTAAGTATACATCCGATGGCAACCTTGTTAATCCAGCATTTGATATCGTCAATGTGATAGGAACAGGTTCTCGGAGGATTGGTTATTGGTCTAATTACTCTGGATTGTCGGTTGTTCCTCCCGAAGCACTTTATTCAAAACCAGCCAATCATTCCAGTGCAAATCAAAAGCTACTCCCTGTGCTTTGGCCTGGAGAAACAACCCAGAAGCCTCGTGGTTGGGTTTTTCCAAACAATGGCAGACACTTAAGAATTGGAATACCAAAAAGGGTTAGTTACCGAGAATTTGTCTCACAAGTACAAGGCACTGACTTGTTTAAGGGATTCTGCATTGATGTATTTCTCTCTGCTGTGAACTTATTGCCCTATGCTGTCCCCTATAAATTTATCCCATTTGGGGATGGTCGCAGCAATCCTAGTAAAACTGAGCTTGTTCGTCTGATCACCATGGGTGTCTTTGATGGTGGAGTAGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATTTATCGAGTCTGGTCTAGTAGTGGTAGCACCAGTTAGGAAGATGGAGTCTAATGCTTGGGCCTTTCTAAGACCATTTACGCCAATGATGTGGTGTGTTACAGCGATCTTTTTCTTTGTAGTGGGAGCTGTTGTTTGGATTTTGGAGCATAGGCTGAATGATGATTTTCGGGGACCTCCTAAAAAACAAGTTGTAACAATATTATGGTTTAGTTTTTCTACTATGTTCTTTGCCCACAGGGAAAATACAGTGAGCACTCTTGGTCGCTTTGTGCTACTTATATGGTTATTTGTTGTTCTTATAATTAATTCGAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAACAGCTTTCTTCACCCATTAAAGGCATCGAAAGCTTAGTAAATAGCAAAGAGCCTGTTGGCTACTTGCAGGGTTCTTTCACTCGGAATTATTTAGTTGAGGAAGTTGGTATTCATGAATCAAGACTTGTACCTCTGAAAACACCAGATGATACTGCTAAAGCATTGAAAGATGGTCCCAAGAAAGGTGGTGTTGCTGCATATGTCGATGAGCGTGCTTACGTAGAGCTCTTCCTTTCAAGCCGGTGTGATTTTACTGTCATAGGTCACGAGTTCACCCGAAATGGTTGGGGATTTGCCTTTCCAAGAGACTCTCCTTTAGCAGTTGACCTGTCAACTGCAATTCTGGAATTGGCAGAGAATGGAGATCTTCAGAGGATCCATGACAAATGGCTTTTGAACAGTGCTTGCCTGTCACAAGGTGCAAAGCTTGAAGTGGACAGGCTCAATCTCAAAGCCTTCTGGGGCCTTTACTTAGTATGTGGGCTTGCTTGCTGTCTTGCTCTCCTCATCTATTTTATACAGATGATGAGGCAGTACAACAAACACTACCACGAGGAACTTGAGTCTTCTGGCCGGAGCACCAGATCTTCGCGCCTCTGGACTTTTCTGTCATTTGCTGATGAAAAAGAAGAGGAAGTTAAGCACCGCTCCAAGGGACGGCAAATGGAGAGGATCTCATACAGAAGCAACAGTGAGGTTGGTTCTGAAAGAAATGATTGGATCCCAAGAGGGGGGTGA 3057 0.4325 MRRRHNLFVAEGGGGACIAIASIGSGVYLLLIVQKKCGQQPYWVHIFHFIFWVFWIYSSYGDAQVLRNVDGLALVGVYPHLNHTCSLMQLPTMIGVWLVVLMVFSNGLSSSGVGMNYSAIPEFVNIGALFSFNTTVGRIVKIAIEAAIEDVNADPSILGKTKLRVSMQEDSKYRGFLSIAEVLQLMSRHTVAVIGPQTSTTAHVISHVANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDIYQMTVIAELVDFYGWREVIALYVDDDHGRNGIGALGDKLAERRCKISYKAPISPEPTREEIADVLVQVALAESRIIVFHSNAAWGPRVFSVAKYLGMMGSGYVWIATNFVSTLLDTESPLPSYEMDDIQGVLTLRVHTADSEVKRRFFARWKNLTSGMTSNGPLGLSTFGLYAYDTVYVLAHALDTFFKQGNRITFSYDSKLSELHGDSLHLDAVNIFDQGNLLRKTIYEVNMTGVTGHIKYTSDGNLVNPAFDIVNVIGTGSRRIGYWSNYSGLSVVPPEALYSKPANHSSANQKLLPVLWPGETTQKPRGWVFPNNGRHLRIGIPKRVSYREFVSQVQGTDLFKGFCIDVFLSAVNLLPYAVPYKFIPFGDGRSNPSKTELVRLITMGVFDGGVGDITITTERTKMVDFTQPFIESGLVVVAPVRKMESNAWAFLRPFTPMMWCVTAIFFFVVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKEPVGYLQGSFTRNYLVEEVGIHESRLVPLKTPDDTAKALKDGPKKGGVAAYVDERAYVELFLSSRCDFTVIGHEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLNSACLSQGAKLEVDRLNLKAFWGLYLVCGLACCLALLIYFIQMMRQYNKHYHEELESSGRSTRSSRLWTFLSFADEKEEEVKHRSKGRQMERISYRSNSEVGSERNDWIPRGG 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2910 1018 CDD GluR_Plant 564 904 - -
Bisa01g2910 1018 Gene3D - 556 674 - -
Bisa01g2910 1018 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 415 427 - -
Bisa01g2910 1018 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 198 226 - -
Bisa01g2910 1018 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 137 153 - -
Bisa01g2910 1018 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 124 972 IPR015683 -
Bisa01g2910 1018 FunFam Glutamate receptor 559 675 - -
Bisa01g2910 1018 Pfam Receptor family ligand binding region 141 502 IPR001828 -
Bisa01g2910 1018 Pfam Ligand-gated ion channel 905 937 IPR001320 GO:0015276|GO:0016020
Bisa01g2910 1018 FunFam Glutamate receptor 240 391 - -
Bisa01g2910 1018 SMART GluR_14 563 906 IPR001320 GO:0015276|GO:0016020
Bisa01g2910 1018 CDD PBP1_GABAb_receptor_plant 125 521 IPR044440 -
Bisa01g2910 1018 Gene3D - 240 517 - -
Bisa01g2910 1018 Pfam Bacterial extracellular solute-binding proteins, family 3 623 904 IPR001638 -
Bisa01g2910 1018 FunFam Glutamate receptor 675 805 - -
Bisa01g2910 1018 Gene3D - 675 803 - -
Bisa01g2910 1018 MobiDBLite consensus disorder prediction 987 1018 - -
Bisa01g2910 1018 Gene3D - 850 911 - -
Bisa01g2910 1018 Gene3D - 142 492 - -
Bisa01g2910 1018 SUPERFAMILY Periplasmic binding protein-like I 119 556 IPR028082 -
Bisa01g2910 1018 PIRSF IGluLR_plant 90 1013 IPR017103 -
Bisa01g2910 1018 FunFam Glutamate receptor 801 908 - -
Bisa01g2910 1018 SUPERFAMILY Periplasmic binding protein-like II 539 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2910 Bisa-ChrBisa01 59394717 59400137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2910 97 1005 Ion Channels AT3G51480 60.307 0.0 1175