Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2904 ATGGCTGATCAAGGAAGCACTGGACACTCTGTTGCAACCTCTTCTCCTACCCCATTAATAAACTGGTGGGATCTCCATGCAACTTCACTTTCTTCCTGGACTAAAAATACTAACAACAACGCATGGAACAATCAACCAAACCCTGATTCTAATTCCTCTTCATGTGAGGATCAGGATATTTCAATTTCTACATCTTTCACCAACGCCTCTAACCATTCAAGCCTCACCGACGAGTCCCCTCGCCCACTTGTCGAGCTTCTGGCGGCTTCCTCCAATTCCTTGATGGGAGAACATGCTTCTGATAACCACCTTTGGAGTCATCTTTTATTGGGCACTGTTGGAAGCAACGAGGACCTGCAAAATAGCCAAGTTGGAGAGAACTTCCTGGATGCACTATCATCGAAAGGCATGACGAACAAGCCAAGTTGGGAATACAATAACATTAATAGCTGTGCTACATCTTTCAATAGTTTTGAGAAACACAATAATGGCTTTAGCGAAGCCATACAGCTTGAAAGCCAAAGGTTGAACAAGCTATCTAGTCTTGTGACTTGGTCCATTGCCCCACCAGATCCTGAAGTCAATAACAATACCCAGTTCGATCCACAAACGAACACTAATGTAACTTTGAATTCTACAATAATGGATAATTCCGGAATTTCTCCTTGCTGTGTTCTTGACATGAATGTCAAGCAAGAGCATCATCATGGTGATGCAAACGGAGTACCAGGAGCTCTATTCGGAATTTCATGCAATAGTAGTACCATTGGATATCAAAATGGGTTTAGCAATCCCGTGGGAGTGGGAGACAATAATAATGGCAAATTTTACCATGGAATGCCCAGTCTTAATCCTTCATGTACAAGAAATTTGACAGATGTTATATCTTTTACGGGTCGACTAGGCAGGCCGATCATTGGAGTTCATGCACTGAAACCCACTTTGAAATCCTCACATATTTTGGATTCCAAGAAGCAAGGTTTTCAGACATCATCCCTGTCAAGGACTAATAATGGAAGAAGACAAGGGAGTGGCACTGAAGTAAAGAAGAAAAGATCAGAAGACTGTTCTGAAGCAATCTTAAAGAAGCCTAAGCAAGAGACATCTACAGTATCTTCTACAAAGGTGCAAGCACCCAAAGCCAAGCTGGGGGACAAGATTACAACCCTTCAGCAAATTGTGTCGCCATTTGGAAAGACAGATACGGCATCGGTGCTTTTTGAAGCAATTGGGTACATAAAGTTCTTACAAGAACAAATCCAGGTGCTACTGAGCAATTCTTACATGAAGACTAACTCGCGCAAGGATATGTGGTGTAGCTTGGACGGAAAAGATAAAGGAGATGCAAAAGTTGACCTTAGGAGCAGAGGTCTTTGTTTAGCTCCAATCTCATGTACTCCTCAAGTTTATAGAGAGAACACTGGACCAGATTACTGGACCCCAGCTTACAGAGGATGCTTATATAGGTGA 1470 0.4252 MADQGSTGHSVATSSPTPLINWWDLHATSLSSWTKNTNNNAWNNQPNPDSNSSSCEDQDISISTSFTNASNHSSLTDESPRPLVELLAASSNSLMGEHASDNHLWSHLLLGTVGSNEDLQNSQVGENFLDALSSKGMTNKPSWEYNNINSCATSFNSFEKHNNGFSEAIQLESQRLNKLSSLVTWSIAPPDPEVNNNTQFDPQTNTNVTLNSTIMDNSGISPCCVLDMNVKQEHHHGDANGVPGALFGISCNSSTIGYQNGFSNPVGVGDNNNGKFYHGMPSLNPSCTRNLTDVISFTGRLGRPIIGVHALKPTLKSSHILDSKKQGFQTSSLSRTNNGRRQGSGTEVKKKRSEDCSEAILKKPKQETSTVSSTKVQAPKAKLGDKITTLQQIVSPFGKTDTASVLFEAIGYIKFLQEQIQVLLSNSYMKTNSRKDMWCSLDGKDKGDAKVDLRSRGLCLAPISCTPQVYRENTGPDYWTPAYRGCLYR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2904 489 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 381 427 IPR036638 GO:0046983
Bisa01g2904 489 MobiDBLite consensus disorder prediction 37 58 - -
Bisa01g2904 489 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 367 416 IPR011598 GO:0046983
Bisa01g2904 489 MobiDBLite consensus disorder prediction 326 343 - -
Bisa01g2904 489 CDD bHLH_AtbHLH_like 380 423 IPR045239 -
Bisa01g2904 489 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 469 - -
Bisa01g2904 489 MobiDBLite consensus disorder prediction 326 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2904 Bisa-ChrBisa01 59128384 59132487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2904 17 489 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 32.530 2.61e-47 167