Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2885 ATGCTCTCACTATCTTTTCCTTCGTCTCTCGCCGCTCCCGACCTCTCCGGTAAAACCCTCTTTTCTCCGCCGCGTCGCGTCGGATCCCGACCAGTACTCGCTTTTGCCACCGCCACCGCCACCACAACGGCTACTGAAGATCGCTCTACTTGGACCGAGCAACCAAGGTCGCCGTATCTGAACAGCCGTGGTACGGCTTCGCGGACATCGCTCTACGAGGTTCTAGGTATATCCGCCGGTGCCTCGAATCAAGAGATCAAGGCAGCGTACCGGCGACTGGCGAGAGCTTGCCATCCCGATGTGGCGGCGGTGGACCGGAAAAACTCGTCGGCGGACGATTTCATGAGGATTCACGCTGCCTACTCCACTCTATCCGACCCCGAAAAGCGCGCCGATTACGACCGGAGCCTTCTCCGGAGCACACGGCCATTGACGATGGCGTCGCTATTTCCCGGCTACACTTGTCGGAGCTGGGAAACGGACCAGTGCTGGTAG 495 0.596 MLSLSFPSSLAAPDLSGKTLFSPPRRVGSRPVLAFATATATTTATEDRSTWTEQPRSPYLNSRGTASRTSLYEVLGISAGASNQEIKAAYRRLARACHPDVAAVDRKNSSADDFMRIHAAYSTLSDPEKRADYDRSLLRSTRPLTMASLFPGYTCRSWETDQCW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2885 164 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 43 144 - -
Bisa01g2885 164 Gene3D DnaJ domain 59 146 IPR036869 -
Bisa01g2885 164 PRINTS DnaJ domain signature 90 105 IPR001623 -
Bisa01g2885 164 PRINTS DnaJ domain signature 109 129 IPR001623 -
Bisa01g2885 164 PRINTS DnaJ domain signature 72 90 IPR001623 -
Bisa01g2885 164 SUPERFAMILY Chaperone J-domain 67 142 IPR036869 -
Bisa01g2885 164 CDD DnaJ 72 126 IPR001623 -
Bisa01g2885 164 MobiDBLite consensus disorder prediction 39 64 - -
Bisa01g2885 164 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Bisa01g2885 164 SMART dnaj_3 69 129 IPR001623 -
Bisa01g2885 164 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
Bisa01g2885 164 Pfam DnaJ domain 71 134 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2885 Bisa-ChrBisa01 58439397 58439891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2885 60 134 C2H2 Transcription Factor Family AT1G74250 40.506 4.92e-09 52.4