Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2884 ATGAGTCGGCACCAAGGAAGATACGCCCATTGGATAACTCCTTCCGCGTCACGACAGCGCATCTCACGCATCTGTGGGACCCACCCTACCTCTATATACAAACCCACCTACGCTTCTTTCCCACTCCTCCTCACAACTCTCACAAGCCTCAATTCTCAATTCTCAAATCTCAAACTCCTCAAACGACACCGTATCTCACGTAACATGATTTCCCTCTCTTTTCCTTCGTCTTTCTCCGCCACCGATCTCTCCGGCGGGACCTTCTCTTCGCCGCCGCGCCGTGTCAGATCGCGCCCTGTAGTCGCCTTCGCCACCGCCACCGCAACCGCCACCGAAGATCGCTCTACTTGGACCGAGCAACCAAGGCCGTCGTATCTGAACCCCCGTGGTACGGCGTCCTGCACATCTCTCTACGACGTTCTAGGAATCCCAGCCGGTGCCTCAAATCAAGATATAAAGGCGGCGTACCGGCGACTTGCGAGAGTTTGCCACCCCGATGTGGCGGCGATCGACCGGAAAACCTCGTCGGCGGACGAATTCATGAGGATTCACACCGCCTACTCCACTCTATCGGATCCTGAAAAGCGAGCCACTTACGATCGCAGCCTTTTCCGGTCCCAACGGCCGTTGACGATGGCGTCGTTGTTTCCCGGCTACACTTGTCGGAACTGGGAAACGGATCAGTGCTGGTAG 693 0.5642 MSRHQGRYAHWITPSASRQRISRICGTHPTSIYKPTYASFPLLLTTLTSLNSQFSNLKLLKRHRISRNMISLSFPSSFSATDLSGGTFSSPPRRVRSRPVVAFATATATATEDRSTWTEQPRPSYLNPRGTASCTSLYDVLGIPAGASNQDIKAAYRRLARVCHPDVAAIDRKTSSADEFMRIHTAYSTLSDPEKRATYDRSLFRSQRPLTMASLFPGYTCRNWETDQCW 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2884 230 SUPERFAMILY Chaperone J-domain 133 210 IPR036869 -
Bisa01g2884 230 CDD DnaJ 138 192 IPR001623 -
Bisa01g2884 230 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 51 211 - -
Bisa01g2884 230 Gene3D DnaJ domain 126 214 IPR036869 -
Bisa01g2884 230 PRINTS DnaJ domain signature 175 195 IPR001623 -
Bisa01g2884 230 PRINTS DnaJ domain signature 138 156 IPR001623 -
Bisa01g2884 230 PRINTS DnaJ domain signature 156 171 IPR001623 -
Bisa01g2884 230 SMART dnaj_3 135 195 IPR001623 -
Bisa01g2884 230 Pfam DnaJ domain 137 200 IPR001623 -
Bisa01g2884 230 ProSiteProfiles dnaJ domain profile. 136 203 IPR001623 -
Bisa01g2884 230 ProSitePatterns Nt-dnaJ domain signature. 180 199 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2884 Bisa-ChrBisa01 58429581 58430273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2884 138 200 C2H2 Transcription Factor Family AT1G74250 41.791 2.60e-07 48.9