Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2883 ATGGGTATCTGTATTTCTACCTCAAGAGTCAGTGGCTCTAACAGCAATAGCACAAACGCCGGCGCCACCACCACCGCCGTTAATCAAAATCGTGAAGAGGGAACCAAGCGGCAATCCAGGAGTACCTCGGGCAATAAACAACAAAAGTCAAGCAATCAACGACAAAAAACATCGAATGAGAAGCAGAAGAAGAATTCCCAGAAGCAAAGGCCCAGAGAAAGCCAAGTTTCCAGACGCAAAGGTGGACTTGTCCCATGCGGGAAGCGTACCGATTTCGGTTATGACAAAGATTTTTACAATAAATACTCTCTCGGAAAATTGTTAGGACATGGGCAATTTGGTTACACGTATGTTGGAATAGATAAAACTAATGGGGATCGAGTGGCCGTCAAGAGACTTGAGAAGGCCAAGATGGTTCTCCCTATTGCTGTGGAGGATGTTAAACGAGAGGTTAAGATATTGAAACAATTGACAGGCCATGAGAATGTTGTCCAGTTTTATAATGCTTTTGAGGATGATTCATATGTCTACATAGTCATGGAGTTATGTGAGGGTGGAGAACTGTTAGATCGAATATTGGCCAAGAAGGACAGCCGTTATACTGAAAAAGATGCAGCAGTGGTTGTAAGGCAAATGCTCAAGGTTGCAGCTGAGTGTCATTTACATGGCTTGGTACACAGGGACATGAAACCAGAGAATTTTCTTTTCAAATCTAGTGCAGTAGATTCACCTCTAAAGGCGACAGATTTTGGTTTGTCAGATTTCATAAAGCCTGGAAAGAGATTTCAAGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTACTAAAACGTAAGTCAGGACCTGAATCAGATGTATGGAGTATTGGTGTAATTACATACATATTGCTTTGTGGGAGGCGCCCGTTTTGGGATAAAACTGAGGATGGTATCTTTAAGGAGGTCTTACGGAACAGGCCTGATTTCCGCCGGAAACCATGGCCAACCATAAGTAATGCAGCAAAAGATTTTGTGAAGAAATTGCTGGTAAAGGATCATCGGGCAAGACTAACTGCTGCTCAGGCTTTGTCGCATCCGTGGGTTAGAGAAGGAGGAGAGGCATTGGAGATTCCTATTGATATTTCTGTTCTGAACAACATGCGGCAGTTTGTGAAATATAGTCGACTGAAACAATTTGCACTGAGGGCATTGGCTAGCACACTTGATGAAGATGAATTATCGGATCTCAAAGATCAATTTGACGCTATAGACGTGGATAAAAATGGTTCCATCAGTCTGGAAGAGATGAGACAGGCTCTTGCTAAAGATCGCCCTTGGAAGTTGAAAGATTCACGTGTGTTAGAGATACTGCAAGCGATTGACAGCAACACAGATGGCCTTGTGGATTTCTCGGAGTTTGTGGCAGCTACATTACATGTCCATCAATTGGAGGAGCATGATTCTGATAAGTGGCGGCAACGGTCACAGGCAGCTTTTGAGAAATTTGATGTAGACAAGGATGGCTACATTACTCCAGAAGAACTTAGAATGCATACGGGTTTAAGAGGCTCCATTAATCCACTGCTTGAGGAAGCTGACATTAACAAAGATGGAAGAATCAGCCTATCAGAGTTCCGTAGGCTCCTAAGAACTGCAAGCATGGGTTCAGGACATGTACCAAGCCCCCGCAAGGTCTAA 1680 0.4357 MGICISTSRVSGSNSNSTNAGATTTAVNQNREEGTKRQSRSTSGNKQQKSSNQRQKTSNEKQKKNSQKQRPRESQVSRRKGGLVPCGKRTDFGYDKDFYNKYSLGKLLGHGQFGYTYVGIDKTNGDRVAVKRLEKAKMVLPIAVEDVKREVKILKQLTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSSAVDSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNRPDFRRKPWPTISNAAKDFVKKLLVKDHRARLTAAQALSHPWVREGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDEDELSDLKDQFDAIDVDKNGSISLEEMRQALAKDRPWKLKDSRVLEILQAIDSNTDGLVDFSEFVAATLHVHQLEEHDSDKWRQRSQAAFEKFDVDKDGYITPEELRMHTGLRGSINPLLEEADINKDGRISLSEFRRLLRTASMGSGHVPSPRKV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2883 559 SUPERFAMILY Protein kinase-like (PK-like) 98 374 IPR011009 -
Bisa01g2883 559 ProSiteProfiles EF-hand calcium-binding domain profile. 522 549 IPR002048 GO:0005509
Bisa01g2883 559 Pfam Protein kinase domain 102 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2883 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Bisa01g2883 559 Gene3D Phosphorylase Kinase; domain 1 95 187 - -
Bisa01g2883 559 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Bisa01g2883 559 Gene3D Transferase(Phosphotransferase) domain 1 188 382 - -
Bisa01g2883 559 SMART serkin_6 102 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2883 559 ProSitePatterns EF-hand calcium-binding domain. 527 539 IPR018247 -
Bisa01g2883 559 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Bisa01g2883 559 FunFam CDPK-related kinase 1 95 187 - -
Bisa01g2883 559 Gene3D - 403 472 - -
Bisa01g2883 559 CDD STKc_CAMK 101 361 - -
Bisa01g2883 559 SMART efh_1 446 474 IPR002048 GO:0005509
Bisa01g2883 559 SMART efh_1 518 546 IPR002048 GO:0005509
Bisa01g2883 559 SMART efh_1 488 516 IPR002048 GO:0005509
Bisa01g2883 559 SMART efh_1 409 437 IPR002048 GO:0005509
Bisa01g2883 559 FunFam Calcium-dependent protein kinase 28 403 472 - -
Bisa01g2883 559 MobiDBLite consensus disorder prediction 1 84 - -
Bisa01g2883 559 MobiDBLite consensus disorder prediction 40 55 - -
Bisa01g2883 559 Pfam EF-hand domain pair 408 471 IPR002048 GO:0005509
Bisa01g2883 559 Pfam EF-hand domain pair 490 543 IPR002048 GO:0005509
Bisa01g2883 559 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Bisa01g2883 559 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 536 - -
Bisa01g2883 559 SUPERFAMILY EF-hand 391 545 IPR011992 -
Bisa01g2883 559 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Bisa01g2883 559 FunFam calcium-dependent protein kinase 28-like 188 381 - -
Bisa01g2883 559 MobiDBLite consensus disorder prediction 1 32 - -
Bisa01g2883 559 ProSiteProfiles Protein kinase domain profile. 102 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2883 559 ProSitePatterns EF-hand calcium-binding domain. 418 430 IPR018247 -
Bisa01g2883 559 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Bisa01g2883 559 Gene3D - 383 542 - -
Bisa01g2883 559 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Bisa01g2883 559 MobiDBLite consensus disorder prediction 56 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2883 Bisa-ChrBisa01 58361261 58365926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2883 1 556 EF-hand Containing Proteins AT2G17890 74.911 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa01g2883 Pkinase 4.9e-68 CL0016