Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2863 ATGATTGGGTCTCCCGACATCGTTGCAAGATTCCTGAGACTCGCCACTGTCCTGCCTCTGTTGTCAATCTCTATATCTCACCACCCACCTCGACGCTATGCCTTCTTCTCGTTGCTATCTCCCTCTCGGCAGTTCTGGTTTTGCTTTCAGCTTCTTATGGTGCTTGGCTTCATCGGTTCAGTTACTGCTTGCTGGTGTCTAAAGATTCGGCCTAAGGTAATCCGGACGGTATTTGTGAGAGATCCAGAACGGCGGCGTTTAGATCAAACCTCTCGTGTTTATCTTTCCAGAAACCCTAGCTCCAGTATTCCCTTCATTTCTGCACAGAGCACTGCCGCAGAGGAGCTCTCAGAGGTCGATACCATGGGACGAGTAATTCGTGCACAGCGTAAGGGTGCTGGCTCCGTCTTCAAGTCCCACACCCATCACCGCAAGGGTCCCGCTAGGTTCCGCAGCCTCGACTTTGGCGAACGAAATGGGTATCTCAAAGGGGTCGTCACCGATGTCATCCACGACCCTGGTCGTGGTGCTCCGCTTGCCAAGGTCACTTTCCGCCACCCCTTCAGGTACAAGAAGCAGTGCGAGCTCTTCGTCGCCGCCGAGGGTATGTACACTGGTCAGTTTGTCTACTGCGGCAAGAAAGCCACCCTTGTCGTCGGTAACGTTTTGCCCCTCAGATCCATTCCTGAAGGAGCTGTTATCTGCAATGTCGAGCACCATGTTGGTGATCGTGGCGTATTCGCTAGGTGTTCTGGTGATTACGCTATTGTTATCAGCCACAACCCTGATAACGATACCTCTAGGATCAAGCTTCCATCTGGGGCAAAGAAGATAGTACCCAGTGGTTGCAGGGCCATGATCGGGCAGGTTGCAGGTGGAGGGAGAACCGAGAAGCCCCTTCTCAAAGCTGGTAATGCATACCACAAGTTCAAGGTGAAGAGGAATTGCTGGCCTAAGGTTCGTGGTGTTGCTATGAACCCTGTTGAGCATCCTCATGGAGGAGGTAACCACCAGCACATTGGACATGCAAGTACTGTTAGGCGTGATGCTCCTCCTGGCCAGAAGGTCGGTCTCATTGCCGCCAAGAGGACTGGTCGTCTTAGGGGACAAGCTGCTGCAACTGCTGCTAAAGCTGATAAGACTTCTTAA 1149 0.5257 MIGSPDIVARFLRLATVLPLLSISISHHPPRRYAFFSLLSPSRQFWFCFQLLMVLGFIGSVTACWCLKIRPKVIRTVFVRDPERRRLDQTSRVYLSRNPSSSIPFISAQSTAAEELSEVDTMGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVTFRHPFRYKKQCELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAKRTGRLRGQAAATAAKADKTS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2863 382 Gene3D Ribosomal protein L2, domain 3 291 368 IPR014726 -
Bisa01g2863 382 SMART Ribosomal_L2_2 132 211 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bisa01g2863 382 FunFam 60S ribosomal protein L2 291 368 - -
Bisa01g2863 382 PANTHER RIBOSOMAL PROTEIN L2 115 376 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bisa01g2863 382 Gene3D - 211 290 IPR014722 -
Bisa01g2863 382 SUPERFAMILY Nucleic acid-binding proteins 121 218 IPR012340 -
Bisa01g2863 382 Gene3D - 122 207 IPR012340 -
Bisa01g2863 382 ProSitePatterns Ribosomal protein L2 signature. 318 329 IPR022671 GO:0003735|GO:0005840|GO:0006412
Bisa01g2863 382 MobiDBLite consensus disorder prediction 331 351 - -
Bisa01g2863 382 FunFam 60S ribosomal protein L8 211 290 - -
Bisa01g2863 382 Pfam Ribosomal Proteins L2, RNA binding domain 134 211 IPR022666 GO:0003735|GO:0005840|GO:0006412
Bisa01g2863 382 SMART Ribosomal_L2_C_2 217 352 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bisa01g2863 382 SUPERFAMILY Translation proteins SH3-like domain 220 367 IPR008991 -
Bisa01g2863 382 FunFam 60S ribosomal protein L2 122 207 - -
Bisa01g2863 382 Pfam Ribosomal Proteins L2, C-terminal domain 219 346 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2863 Bisa-ChrBisa01 57764274 57767419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2863 122 379 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 93.023 0.0 503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1779 11 39571064 39572428 Bisa01g2863 01 57764274 57767419 CCT
Bisa01g2863 01 57764274 57767419 Bisa01g2863 01 57764274 57767419 ECH