Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2858 ATGATGGAGTCGATGGAGTCATGTGTCCCACCGGGGTTTCGTTTCCACCCAACCGATGAAGAGCTTGTTGGCTATTATCTAAGGAAGAAAGTTGCTTCTCAGAAGATCGATCTTGATGTCATCAGAGAGATCGATCTTTATCGTATAGAACCATGGGATCTTCAAGAGAGATGCTGGATCGGGTACGAGGAGCAGAACGAGTGGTATTTCTTCAGCCACAAGGACAAGAAATATCCGACAGGGACGAGGACGAACAGAGCTACGATGGCGGGATTCTGGAAGGCGACAGGAAGAGACAAGGCGGTGTACGACAAGGCGAAGCTCATCGGCATGAGGAAGACCCTCGTCTTCTACAAAGGAAGAGCTCCTAATGGCCAGAAAACTGACTGGATCATGCACGAATATAGGCTCGAATCCGATGAGAATGGACCTCCCCAGGAAGAAGGATGGGTTGTATGCAGAGCTTTCAAGAAAAAAACCAGTGGGCAAACGAAGGCCATTGAAGAATGGGATTCAAGCTACTTCTTCGAGGAAAGCGCTGGAGTGAGCTCGGTGGTAGATCCTGTGGACTTTATCTCAAGGCAGCCTCATCAGAATTATAATCTAGCTCAAAGTCAAAACAACTACCTGTGCAAGCAAGAGATAGAAGTGAATAACTTGAGTGCTTTCATGAACTCATCAGACCAATTCATACAGCTTCCTCAGCTGGAAAGCCCGTCTCTGCCATTGTTAAAGAGGCCAAGCTCTGTAATGTCTTTAATATCAGACAACAACATTAACAATAACGAAGAAGATGATCACCAACCCACAAAGAATGTGACAACTGATTGGAGGGCTCTCGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGACAGATTCGAAACACCCAATAATAATAATAATAATAATAGTTCCGATATGCCGTCGTTGCTGTTACTGCAGAGTTATTCTACTACAAGCAAGGATGAAGAAGAAGAAGGGAACAAGATAAGCTTGAGCCCATTTTTAAATACAAGAAGCTCGTCAGACTGTGACATTGGGATATGCGTATTTGACAAATGA 1065 0.446 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCWIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTSGQTKAIEEWDSSYFFEESAGVSSVVDPVDFISRQPHQNYNLAQSQNNYLCKQEIEVNNLSAFMNSSDQFIQLPQLESPSLPLLKRPSSVMSLISDNNINNNEEDDHQPTKNVTTDWRALDKFVASQLSQEDRFETPNNNNNNNSSDMPSLLLLQSYSTTSKDEEEEGNKISLSPFLNTRSSSDCDIGICVFDK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2858 354 MobiDBLite consensus disorder prediction 288 309 - -
Bisa01g2858 354 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Bisa01g2858 354 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Bisa01g2858 354 FunFam NAC domain-containing protein 18 162 - -
Bisa01g2858 354 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Bisa01g2858 354 MobiDBLite consensus disorder prediction 289 309 - -
Bisa01g2858 354 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Bisa01g2858 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2858 Bisa-ChrBisa01 57667006 57669859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2858 2 353 NAC Transcription Factor Family AT2G18060 64.921 3.29e-163 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa01g2858 NAM 4.2e-38 No_clan